RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 DEFB1P60022 68 aa11.55□□□□□ -0.56
TRAPPC8-210ENST00000582513 EIF4EBP3O60516 100 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 SS18Q15532 418 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 BRD3OSQ6XYD6 125 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 SPANXDQ9BXN6 97 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 COX6B1P14854 86 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 LMO4P61968 165 aa11.54□□□□□ -0.56
TRAPPC8-210ENST00000582513 MGPP08493 103 aa11.53□□□□□ -0.56
TRAPPC8-210ENST00000582513 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
TRAPPC8-210ENST00000582513 IGF1P05019 195 aa11.53□□□□□ -0.56
TRAPPC8-210ENST00000582513 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.56
TRAPPC8-210ENST00000582513 C19orf84I3L1E1 186 aa11.52□□□□□ -0.56
TRAPPC8-210ENST00000582513 DAZ4Q86SG3 579 aaKnown RBP11.52□□□□□ -0.56
TRAPPC8-210ENST00000582513 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.56
TRAPPC8-210ENST00000582513 DAZ1Q9NQZ3 744 aaKnown RBP11.52□□□□□ -0.56
TRAPPC8-210ENST00000582513 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
TRAPPC8-210ENST00000582513 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
TRAPPC8-210ENST00000582513 AVPP01185 164 aa11.51□□□□□ -0.57
TRAPPC8-210ENST00000582513 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
TRAPPC8-210ENST00000582513 C20orf173Q96LM9 149 aa11.51□□□□□ -0.57
TRAPPC8-210ENST00000582513 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 LINC00474Q9P2X8 69 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 CELSR2Q9HCU4 2923 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 NDUFC2O95298 119 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 LY6EQ16553 131 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-210ENST00000582513 DNAL4O96015 105 aa11.49□□□□□ -0.57
TRAPPC8-210ENST00000582513 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
TRAPPC8-210ENST00000582513 PRR9Q5T870 116 aa11.49□□□□□ -0.57
TRAPPC8-210ENST00000582513 UNQ9165/PRO28630Q6UXU0 137 aa11.49□□□□□ -0.57
TRAPPC8-210ENST00000582513 CNFNQ9BYD5 112 aa11.49□□□□□ -0.57
TRAPPC8-210ENST00000582513 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 KNCNA6PVL3 124 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 I3L3M4 83 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 M0R381 172 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 CRYBG3Q68DQ2 2970 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 TRAV23DV6A0A075B6W5 121 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 U3KQE9 123 aa11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 RPL39LQ96EH5 51 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-210ENST00000582513 IGHV7-4-1A0A0J9YVY3 117 aa11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 CXCL5P42830 114 aa11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1A1P0DJD3 496 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1CP0DJD4 496 aa11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 RBMY1FQ15415 496 aaKnown RBP11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 GHRHP01286 108 aa11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 PRIMA1Q86XR5 153 aa11.47□□□□□ -0.57
TRAPPC8-210ENST00000582513 TMEM89A2RUT3 159 aa11.46□□□□□ -0.58
TRAPPC8-210ENST00000582513 LST1O00453 97 aa11.46□□□□□ -0.58
TRAPPC8-210ENST00000582513 NXPH4O95158 308 aa11.46□□□□□ -0.58
TRAPPC8-210ENST00000582513 TIRAPP58753 221 aa11.46□□□□□ -0.58
TRAPPC8-210ENST00000582513 F6UB75 175 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 BAALC-AS2P0C853 105 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 WFDC9Q8NEX5 89 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 TIMM17BO60830 172 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 GNLYP22749 145 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 ITLN2Q8WWU7 325 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 TP53TG1Q9Y2A0 90 aa11.45□□□□□ -0.58
TRAPPC8-210ENST00000582513 CSMD2Q7Z408 3487 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 DAND5Q8N907 189 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 IGHV4-38-2P0DP08 117 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 TOMM6Q96B49 74 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
TRAPPC8-210ENST00000582513 PKD1L2Q7Z442 2459 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 SMIM26A0A096LP01 95 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 SERP1Q9Y6X1 66 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 FLNCQ14315 2725 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 Q96MF0 132 aa11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 UTP20O75691 2785 aaKnown RBP11.43□□□□□ -0.58
TRAPPC8-210ENST00000582513 HILS1P60008 231 aa11.42□□□□□ -0.58
TRAPPC8-210ENST00000582513 GPHB5Q86YW7 130 aa11.42□□□□□ -0.58
TRAPPC8-210ENST00000582513 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
TRAPPC8-210ENST00000582513 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC8-210ENST00000582513 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
TRAPPC8-210ENST00000582513 BLCAPP62952 87 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms