RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PHLDA1Q8WV24 401 aaPredicted RBP10.43□□□□□ -0.74
MKS1-211ENST00000581761 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
MKS1-211ENST00000581761 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
MKS1-211ENST00000581761 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
MKS1-211ENST00000581761 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
MKS1-211ENST00000581761 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 ANKRD39Q53RE8 183 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
MKS1-211ENST00000581761 CHTOPQ9Y3Y2 248 aaKnown RBP10.42□□□□□ -0.74
MKS1-211ENST00000581761 TRGV4A0A0C4DH28 118 aa10.41□□□□□ -0.74
MKS1-211ENST00000581761 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
MKS1-211ENST00000581761 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
MKS1-211ENST00000581761 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
MKS1-211ENST00000581761 RPL36AP83881 106 aaKnown RBP10.41□□□□□ -0.74
MKS1-211ENST00000581761 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
MKS1-211ENST00000581761 RPL36ALQ969Q0 106 aaKnown RBP10.41□□□□□ -0.74
MKS1-211ENST00000581761 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 F8VRH5 84 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 COTL1Q14019 142 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 LINC00612Q8N6U2 182 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 STPG4Q8N801 248 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
MKS1-211ENST00000581761 ZMAT5Q9UDW3 170 aaKnown RBP10.4□□□□□ -0.74
MKS1-211ENST00000581761 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 GAGE12JA6NER3 117 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 DEFB130BP0DP73 79 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 DEFB130AP0DP74 79 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 EGFEM1PQ0D2K5 195 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 GAGE1Q13065 139 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 GAGE4Q13068 117 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 GAGE5Q13069 117 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 SLC25A34Q6PIV7 304 aa10.39□□□□□ -0.75
MKS1-211ENST00000581761 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 PLNP26678 52 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 TCTAP57738 103 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 FHL2Q14192 279 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 PMVKQ15126 192 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
MKS1-211ENST00000581761 TRBV6-4A0A1B0GX49 114 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 LYRM9A8MSI8 78 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 COX8AP10176 69 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 CTAG1AP78358 180 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 ZC2HC1BQ5TFG8 222 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 RNF183Q96D59 192 aa10.37□□□□□ -0.75
MKS1-211ENST00000581761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
MKS1-211ENST00000581761 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
MKS1-211ENST00000581761 MIFP14174 115 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 UBE2D3P61077 147 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 UBE2D2P62837 147 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
MKS1-211ENST00000581761 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
MKS1-211ENST00000581761 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
MKS1-211ENST00000581761 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
MKS1-211ENST00000581761 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 M0R143 59 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 EREGO14944 169 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 DEFB4AO15263 64 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 NMUP48645 174 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 PYGO1Q9Y3Y4 419 aa10.35□□□□□ -0.75
MKS1-211ENST00000581761 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 A8MZ25 164 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
MKS1-211ENST00000581761 Q8NAQ8 132 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 SPANXA1Q9NS26 97 aa10.34□□□□□ -0.75
MKS1-211ENST00000581761 K7EIL1 84 aa10.33□□□□□ -0.76
MKS1-211ENST00000581761 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
MKS1-211ENST00000581761 VCX2Q9H322 139 aa10.33□□□□□ -0.76
MKS1-211ENST00000581761 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
MKS1-211ENST00000581761 COL7A1Q02388 2944 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 NPSP0C0P6 89 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 FGF6P10767 208 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 DAD1P61803 113 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
MKS1-211ENST00000581761 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
MKS1-211ENST00000581761 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
MKS1-211ENST00000581761 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
MKS1-211ENST00000581761 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
MKS1-211ENST00000581761 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
MKS1-211ENST00000581761 DLEU1O43261 78 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 CRYBA4P53673 196 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 BATFQ16520 125 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 CELA1Q9UNI1 258 aa10.3□□□□□ -0.76
MKS1-211ENST00000581761 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 Q6ZUT4 128 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 AMELXQ99217 191 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms