RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 C9orf85Q96MD7 179 aa2.54□□□□□ -2
NUP85-209ENST00000578987 PRADC1Q9BSG0 188 aa2.54□□□□□ -2
NUP85-209ENST00000578987 TMEM70Q9BUB7 260 aa2.54□□□□□ -2
NUP85-209ENST00000578987 SEC11CQ9BY50 192 aa2.54□□□□□ -2
NUP85-209ENST00000578987 GFRA4Q9GZZ7 299 aa2.54□□□□□ -2
NUP85-209ENST00000578987 OSTCQ9NRP0 149 aa2.54□□□□□ -2
NUP85-209ENST00000578987 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
NUP85-209ENST00000578987 VPS13BQ7Z7G8 4022 aa2.53□□□□□ -2
NUP85-209ENST00000578987 K7EP13 123 aa2.53□□□□□ -2
NUP85-209ENST00000578987 PPP1R2P9O14990 202 aa2.53□□□□□ -2
NUP85-209ENST00000578987 SNAI2O43623 268 aa2.53□□□□□ -2
NUP85-209ENST00000578987 GATCO43716 136 aaKnown RBP2.53□□□□□ -2
NUP85-209ENST00000578987 IGLC6P0CF74 106 aa2.53□□□□□ -2
NUP85-209ENST00000578987 RPL23P62829 140 aaKnown RBP2.53□□□□□ -2
NUP85-209ENST00000578987 C10orf91Q5T1B1 145 aa2.53□□□□□ -2
NUP85-209ENST00000578987 LELP1Q5T871 98 aa2.53□□□□□ -2
NUP85-209ENST00000578987 SH2D6Q7Z4S9 175 aa2.53□□□□□ -2
NUP85-209ENST00000578987 COMMD7Q86VX2 200 aa2.53□□□□□ -2
NUP85-209ENST00000578987 C15orf54Q8N8G6 183 aa2.53□□□□□ -2
NUP85-209ENST00000578987 NTN5Q8WTR8 489 aaPredicted RBP2.53□□□□□ -2
NUP85-209ENST00000578987 TSKUQ8WUA8 353 aa2.53□□□□□ -2
NUP85-209ENST00000578987 ISOC2Q96AB3 205 aa2.53□□□□□ -2
NUP85-209ENST00000578987 SFRP2Q96HF1 295 aa2.53□□□□□ -2
NUP85-209ENST00000578987 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
NUP85-209ENST00000578987 TM2D2Q9BX73 214 aa2.53□□□□□ -2
NUP85-209ENST00000578987 RNASE7Q9H1E1 156 aaKnown RBP2.53□□□□□ -2
NUP85-209ENST00000578987 GTSF1LQ9H1H1 148 aa2.53□□□□□ -2
NUP85-209ENST00000578987 RPP21Q9H633 154 aaKnown RBP2.53□□□□□ -2
NUP85-209ENST00000578987 TMEM242Q9NWH2 141 aa2.53□□□□□ -2
NUP85-209ENST00000578987 CBY1Q9Y3M2 126 aa2.53□□□□□ -2
NUP85-209ENST00000578987 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
NUP85-209ENST00000578987 IGKV2D-24A0A075B6R9 120 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 TRBV6-4A0A1B0GX49 114 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 GRIFINA4D1Z8 144 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 A8MWV9 139 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 KRTAP29-1A8MX34 341 aaPredicted RBP2.52□□□□□ -2.01
NUP85-209ENST00000578987 F8W036 122 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 M0R036 132 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 MT-ND4LP03901 98 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 NTF3P20783 257 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 CACNG7P62955 275 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 RHOHQ15669 191 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 ADIRFQ15847 76 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 SPANXN1Q5VSR9 72 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 ZFP2Q6ZN57 461 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 Q75L30 129 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 ZFP82Q8N141 532 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 FER1L6-AS1Q8NA97 138 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 SYT8Q8NBV8 401 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 OR10G8Q8NGN5 311 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 DEFB104AQ8WTQ1 72 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 CNFNQ9BYD5 112 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 KLK12Q9UKR0 248 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 CARHSP1Q9Y2V2 147 aaKnown RBP2.52□□□□□ -2.01
NUP85-209ENST00000578987 CSDC2Q9Y534 153 aaKnown RBP2.52□□□□□ -2.01
NUP85-209ENST00000578987 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 V9GYV3 84 aa2.52□□□□□ -2.01
NUP85-209ENST00000578987 SRRM2Q9UQ35 2752 aaKnown RBP2.52□□□□□ -2.01
NUP85-209ENST00000578987 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 DMBT1Q9UGM3 2413 aaPredicted RBP2.51□□□□□ -2.01
NUP85-209ENST00000578987 TMSB15BA0A087X1C1 80 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 A0A1B0GW15 77 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 SMIM27A0A1W2PRY6 76 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 H3BVH4 76 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 RHODO00212 210 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 ADCYAP1P18509 176 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
NUP85-209ENST00000578987 RPL19P84098 196 aaKnown RBP2.51□□□□□ -2.01
NUP85-209ENST00000578987 FAM74A4Q5TZK3 123 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 UFSP1Q6NVU6 142 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 KCNIP4Q6PIL6 250 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 LYZL1Q6UWQ5 148 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 Q6ZSA8 131 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 GTSF1Q8WW33 167 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 NAT8BQ9UHF3 227 aa2.51□□□□□ -2.01
NUP85-209ENST00000578987 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 A0A087WWC5 75 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 MUC21A0A0G2JKD1 596 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 TRBV10-1A0A0K0K1A3 114 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 MUC21A0A140T8X8 626 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 A0A1B0GUT8 65 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 C7orf77A4D0Y5 90 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 HIGD1CA8MV81 97 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 TMEM262E9PQX1 116 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 M0R381 172 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 SNAPINO95295 136 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 APOC3P02656 99 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 TRGC1P0CF51 173 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 LINC00694P0DN24 101 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 GZMBP10144 247 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 LORP23490 312 aaPredicted RBP2.5□□□□□ -2.01
NUP85-209ENST00000578987 CTRLP40313 264 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 HNRNPA3P51991 378 aaKnown RBP2.5□□□□□ -2.01
NUP85-209ENST00000578987 RAB4BP61018 213 aa2.5□□□□□ -2.01
NUP85-209ENST00000578987 RIGQ13278 110 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms