RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GVQW2A0A096LPI5 108 aaPredicted RBP7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 IGKV3OR2-268A0A0C4DH90 116 aa7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 CACNG7P62955 275 aa7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 NIT2Q9NQR4 276 aa7.27□□□□□ -1.25
CTDNEP1-212ENST00000576613 A0A096LNI7 61 aa7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 TRGC1P0CF51 173 aa7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 RPS20P60866 119 aaKnown RBP7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 TMUB2Q71RG4 321 aa7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 SFT2D1Q8WV19 159 aa7.26□□□□□ -1.25
CTDNEP1-212ENST00000576613 F2Z2F3 143 aa7.25□□□□□ -1.25
CTDNEP1-212ENST00000576613 AMMECR1LQ6DCA0 310 aa7.25□□□□□ -1.25
CTDNEP1-212ENST00000576613 Q6ZRP5 223 aa7.25□□□□□ -1.25
CTDNEP1-212ENST00000576613 FAM213BQ8TBF2 198 aa7.25□□□□□ -1.25
CTDNEP1-212ENST00000576613 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
CTDNEP1-212ENST00000576613 A0A1B0GV50 99 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 XKRY2A2RUG3 117 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 UMAD1C9J7I0 102 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 ARPC5O15511 151 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 RPL35P42766 123 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 KCNRGQ8N5I3 272 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 OR2D3Q8NGH3 330 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 MBD3L1Q8WWY6 194 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 CYTL1Q9NRR1 136 aa7.24□□□□□ -1.25
CTDNEP1-212ENST00000576613 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
CTDNEP1-212ENST00000576613 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
CTDNEP1-212ENST00000576613 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-212ENST00000576613 CARD19Q96LW7 228 aa7.22□□□□□ -1.25
CTDNEP1-212ENST00000576613 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 H7C423 109 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 NCR2O95944 276 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 NTF3P20783 257 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 FOXI1Q12951 378 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 LYZL1Q6UWQ5 148 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 SMIM12Q96EX1 92 aa7.21□□□□□ -1.26
CTDNEP1-212ENST00000576613 IGHV1-58A0A0C4DH39 117 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 C19orf71A6NCJ1 209 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 IFNA1P01562 189 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 APCSP02743 223 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 H2AFB1P0C5Y9 115 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 XCL1P47992 114 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 C11orf52Q96A22 123 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 MANBALQ9NQG1 85 aa7.2□□□□□ -1.26
CTDNEP1-212ENST00000576613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 IGKV2-29A2NJV5 120 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 G3V3Q6 166 aa7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 FGF6P10767 208 aa7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 GNG4P50150 75 aa7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
CTDNEP1-212ENST00000576613 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 CTRLP40313 264 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 TWIST1Q15672 202 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 Q6ZNX1 250 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 ZNF664Q8N3J9 261 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 LINC00526Q96FQ7 95 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 BIN3Q9NQY0 253 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 GNG13Q9P2W3 67 aa7.18□□□□□ -1.26
CTDNEP1-212ENST00000576613 TRAV26-2A0A0B4J265 109 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 CCL25O15444 150 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 CCL20P78556 96 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 ZNF345Q14585 488 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 SMIM15Q7Z3B0 74 aa7.17□□□□□ -1.26
CTDNEP1-212ENST00000576613 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 SS18Q15532 418 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 ISOC2Q96AB3 205 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 RPL39LQ96EH5 51 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 CNFNQ9BYD5 112 aa7.16□□□□□ -1.26
CTDNEP1-212ENST00000576613 RAB19A4D1S5 217 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 TEX46H3BTG2 121 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 MT-ND6P03923 174 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 CAMPP49913 170 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 EIF5AP63241 154 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 EIF5AL1Q6IS14 154 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
CTDNEP1-212ENST00000576613 LPAP08519 4548 aa7.15□□□□□ -1.27
CTDNEP1-212ENST00000576613 KANTRA0A1W2PQU2 76 aa7.14□□□□□ -1.27
CTDNEP1-212ENST00000576613 I3L3M4 83 aa7.14□□□□□ -1.27
CTDNEP1-212ENST00000576613 PDE6DO43924 150 aa7.14□□□□□ -1.27
CTDNEP1-212ENST00000576613 PMCHP20382 165 aa7.14□□□□□ -1.27
CTDNEP1-212ENST00000576613 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
CTDNEP1-212ENST00000576613 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 BCL2L11O43521 198 aa7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 MALP21145 153 aa7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 NUDT10Q8NFP7 164 aa7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 NUDT11Q96G61 164 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms