RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 LINC00694P0DN24 101 aa9.59□□□□□ -0.87
CCDC40-209ENST00000573474 COTL1Q14019 142 aa9.59□□□□□ -0.87
CCDC40-209ENST00000573474 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
CCDC40-209ENST00000573474 TRAV26-1A0A087WT03 109 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 A0A0J9YY99 117 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 LEPROTL1O95214 131 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
CCDC40-209ENST00000573474 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
CCDC40-209ENST00000573474 LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
CCDC40-209ENST00000573474 MEGF8Q7Z7M0 2845 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 DEFB131BA0A096LNP1 70 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 AKR1D1P51857 326 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 ATP6V0E2Q8NHE4 81 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 CYSLTR1Q9Y271 337 aa9.56□□□□□ -0.88
CCDC40-209ENST00000573474 TRAV10A0A0B4J240 114 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 H3BNG1 76 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
CCDC40-209ENST00000573474 TMEM97Q5BJF2 176 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 ICOSQ9Y6W8 199 aa9.55□□□□□ -0.88
CCDC40-209ENST00000573474 LINC00173Q6ZV60 143 aa9.54□□□□□ -0.88
CCDC40-209ENST00000573474 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
CCDC40-209ENST00000573474 ATP5LO75964 103 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 KRTDAPP60985 99 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 SCGB3A1Q96QR1 104 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 MAP1LC3CQ9BXW4 147 aa9.53□□□□□ -0.88
CCDC40-209ENST00000573474 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
CCDC40-209ENST00000573474 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
CCDC40-209ENST00000573474 ERASQ7Z444 233 aa9.52□□□□□ -0.89
CCDC40-209ENST00000573474 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
CCDC40-209ENST00000573474 A0A096LPF7 62 aa9.51□□□□□ -0.89
CCDC40-209ENST00000573474 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
CCDC40-209ENST00000573474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-209ENST00000573474 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
CCDC40-209ENST00000573474 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
CCDC40-209ENST00000573474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-209ENST00000573474 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-209ENST00000573474 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
CCDC40-209ENST00000573474 TIMM17AQ99595 171 aa9.5□□□□□ -0.89
CCDC40-209ENST00000573474 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 H7C423 109 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 JOSD1Q15040 202 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-209ENST00000573474 PET117Q6UWS5 81 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 Q6ZN92 141 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
CCDC40-209ENST00000573474 PRKDCP78527 4128 aaKnown RBP9.49□□□□□ -0.89
CCDC40-209ENST00000573474 COL7A1Q02388 2944 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 UBE2L6O14933 153 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 PRSS1P07477 247 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 NPSP0C0P6 89 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 TIRAPP58753 221 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
CCDC40-209ENST00000573474 C15orf53Q8NAA6 179 aa9.47□□□□□ -0.89
CCDC40-209ENST00000573474 CHCHD5Q9BSY4 110 aa9.47□□□□□ -0.89
CCDC40-209ENST00000573474 UBE2D4Q9Y2X8 147 aa9.47□□□□□ -0.89
CCDC40-209ENST00000573474 C20orf202A1L168 122 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 H0Y8G0 127 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 FGF6P10767 208 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 PYY3Q5JQD4 70 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 LELP1Q5T871 98 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 MRPL52Q86TS9 123 aaKnown RBP9.46□□□□□ -0.9
CCDC40-209ENST00000573474 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
CCDC40-209ENST00000573474 STAB2Q8WWQ8 2551 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 GAGE6Q13070 117 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 LINC01545Q5VT33 79 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 AMMECR1LQ6DCA0 310 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 LGALS9CQ6DKI2 356 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 Q8N976 141 aa9.45□□□□□ -0.9
CCDC40-209ENST00000573474 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
CCDC40-209ENST00000573474 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
CCDC40-209ENST00000573474 IGLL5B9A064 214 aa9.44□□□□□ -0.9
CCDC40-209ENST00000573474 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
CCDC40-209ENST00000573474 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
CCDC40-209ENST00000573474 TMEM101Q96IK0 257 aa9.44□□□□□ -0.9
CCDC40-209ENST00000573474 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
CCDC40-209ENST00000573474 VCX2Q9H322 139 aa9.44□□□□□ -0.9
CCDC40-209ENST00000573474 A0A087WX48 190 aa9.43□□□□□ -0.9
CCDC40-209ENST00000573474 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
CCDC40-209ENST00000573474 ZNF25P17030 456 aaPredicted RBP9.43□□□□□ -0.9
CCDC40-209ENST00000573474 PMVKQ15126 192 aa9.43□□□□□ -0.9
CCDC40-209ENST00000573474 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
CCDC40-209ENST00000573474 FAM104AQ969W3 186 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms