RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 ZNF418Q8TF45 676 aaPredicted RBP13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 LEPROTO15243 131 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 ZNF56Q15929 161 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 FAM74A4Q5TZK3 123 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 C10orf126Q8N4M7 172 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 DEFB104AQ8WTQ1 72 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 MDFICQ9P1T7 246 aa13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 ZNF256Q9Y2P7 627 aaPredicted RBP13.75□□□□□ -0.21
KLHDC4-225ENST00000569487 IGHV1OR15-1A0A075B7D0 117 aa13.74□□□□□ -0.21
KLHDC4-225ENST00000569487 CIDEAO60543 219 aa13.74□□□□□ -0.21
KLHDC4-225ENST00000569487 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
KLHDC4-225ENST00000569487 TMEM223A0PJW6 202 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 TMEM89A2RUT3 159 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 CRLF1O75462 422 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 ZNF688P0C7X2 276 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 SNRPD3P62318 126 aaKnown RBP13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 Q8N1Y9 231 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 K7EQG2 157 aa13.73□□□□□ -0.21
KLHDC4-225ENST00000569487 RNF152Q8N8N0 203 aa13.72□□□□□ -0.21
KLHDC4-225ENST00000569487 C20orf203Q8NBC4 194 aa13.72□□□□□ -0.21
KLHDC4-225ENST00000569487 PRO1854Q9UHT4 67 aa13.72□□□□□ -0.21
KLHDC4-225ENST00000569487 TCL1BO95988 128 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 P0DMU3 169 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 FAM231AP0DMU4 169 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 FAM231CP0DMU5 169 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 TRAV12-2A0A075B6T6 113 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 SFTA2Q6UW10 78 aa13.71□□□□□ -0.21
KLHDC4-225ENST00000569487 I3L3M4 83 aa13.7□□□□□ -0.22
KLHDC4-225ENST00000569487 TEN1Q86WV5 123 aa13.7□□□□□ -0.22
KLHDC4-225ENST00000569487 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
KLHDC4-225ENST00000569487 PPDPFLQ8WWR9 84 aa13.7□□□□□ -0.22
KLHDC4-225ENST00000569487 TENM1Q9UKZ4 2725 aa13.69□□□□□ -0.22
KLHDC4-225ENST00000569487 ZNF22P17026 224 aaPredicted RBP13.69□□□□□ -0.22
KLHDC4-225ENST00000569487 CDIP1Q9H305 208 aa13.69□□□□□ -0.22
KLHDC4-225ENST00000569487 VCX2Q9H322 139 aa13.69□□□□□ -0.22
KLHDC4-225ENST00000569487 EDA2RQ9HAV5 297 aa13.69□□□□□ -0.22
KLHDC4-225ENST00000569487 TRGV11A0A075B6L2 103 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 RHODO00212 210 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 DEFB136Q30KP8 78 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 DUX3Q96PT4 197 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 OPRPNQ99935 248 aaPredicted RBP13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 WNK1Q9H4A3 2382 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 A0A1B0GV72 72 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 IGKV3-20P01619 116 aa13.68□□□□□ -0.22
KLHDC4-225ENST00000569487 IGLV4-3A0A075B6K6 122 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 A0A0B4J2C4 111 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 A8MWV9 139 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 SPINK13Q1W4C9 94 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 CARD19Q96LW7 228 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 ATRQ13535 2644 aa13.67□□□□□ -0.22
KLHDC4-225ENST00000569487 A4D1N5 150 aa13.66□□□□□ -0.22
KLHDC4-225ENST00000569487 M0QXV9 152 aa13.66□□□□□ -0.22
KLHDC4-225ENST00000569487 CD28P10747 220 aa13.66□□□□□ -0.22
KLHDC4-225ENST00000569487 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
KLHDC4-225ENST00000569487 PTH2Q96A98 100 aa13.65□□□□□ -0.22
KLHDC4-225ENST00000569487 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
KLHDC4-225ENST00000569487 IGHV3-33P01772 117 aa13.65□□□□□ -0.22
KLHDC4-225ENST00000569487 SCGB1C2P0DMR2 95 aa13.65□□□□□ -0.22
KLHDC4-225ENST00000569487 KHDC1LQ5JSQ8 128 aa13.65□□□□□ -0.22
KLHDC4-225ENST00000569487 M0R2P5 195 aa13.64□□□□□ -0.23
KLHDC4-225ENST00000569487 EIF4EBP3O60516 100 aaPredicted RBP13.64□□□□□ -0.23
KLHDC4-225ENST00000569487 ELANEP08246 267 aa13.64□□□□□ -0.23
KLHDC4-225ENST00000569487 CRYBA4P53673 196 aa13.64□□□□□ -0.23
KLHDC4-225ENST00000569487 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
KLHDC4-225ENST00000569487 A0A1W2PRX2 142 aa13.63□□□□□ -0.23
KLHDC4-225ENST00000569487 KRTAP10-3P60369 221 aa13.63□□□□□ -0.23
KLHDC4-225ENST00000569487 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
KLHDC4-225ENST00000569487 FHL3Q13643 280 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 MUSTN1Q8IVN3 82 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 C16orf95Q9H693 158 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 ERG28Q9UKR5 140 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 FBN1P35555 2871 aaKnown RBP13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
KLHDC4-225ENST00000569487 ANKRD29Q8N6D5 301 aa13.61□□□□□ -0.23
KLHDC4-225ENST00000569487 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 CITED2Q99967 270 aaPredicted RBP13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 MRPS36P82909 103 aaKnown RBP13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 Q6ZUT4 128 aa13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 UBE2E2Q96LR5 201 aa13.6□□□□□ -0.23
KLHDC4-225ENST00000569487 PROK1P58294 105 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 CKS1BP61024 79 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 A8MTW9 85 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 SLC25A20O43772 301 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 SPINK8P0C7L1 97 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 SLURP1P55000 103 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
KLHDC4-225ENST00000569487 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
KLHDC4-225ENST00000569487 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
KLHDC4-225ENST00000569487 RBMY1FQ15415 496 aaKnown RBP13.58□□□□□ -0.24
KLHDC4-225ENST00000569487 TIMM21Q9BVV7 248 aa13.58□□□□□ -0.24
KLHDC4-225ENST00000569487 NDUFA7O95182 113 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms