RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	S100A16	Q96FQ6	103 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	OBSCN-AS1	Q96MR7	158 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TNS1	Q9HBL0	1735 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	NXT2	Q9NPJ8	142 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TMEM14C	Q9P0S9	112 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	HIGD1B	Q9P298	99 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	MARF1	Q9Y4F3	1742 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	CASP8AP2	Q9UKL3	1982 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	PATJ	Q8NI35	1801 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TET3	O43151	1660 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	EPRS	P07814	1512 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	PRDM15	P57071	1507 aa	Predicted RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	MAP3K1	Q13233	1512 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	DCAF1	Q9Y4B6	1507 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	DOCK11	Q5JSL3	2073 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	PTPRD	P23468	1912 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	LAMB1	P07942	1786 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	ERVK-7	P63135	1459 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	CHD1	O14646	1710 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	ABCA1	O95477	2261 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	DNMBP	Q6XZF7	1577 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	EDC4	Q6P2E9	1401 aa	Known RBP	0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	UACA	Q9BZF9	1416 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SI	P14410	1827 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SBF2	Q86WG5	1849 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV6-7	A0A0A0MS04	114 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	IGLC7	A0M8Q6	106 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	C10orf142	B7Z368	130 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SYS1-DBNDD2	H3BUS1	97 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	FXYD1	O00168	92 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	HCRT	O43612	131 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	PPP1R17	O96001	155 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	IGHV3-30	P01768	117 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	GYPA	P02724	150 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	IGHV3-30-5	P0DP03	117 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	CCL3L1	P16619	93 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	EDDM3B	P56851	147 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	FXYD4	P59646	89 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	KRTDAP	P60985	99 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	UBE2D3	P61077	147 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	UBE2D2	P62837	147 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SSBP1	Q04837	148 aa	Known RBP	0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	FXYD3	Q14802	87 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	ZNF56	Q15929	161 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	ETDB	Q3ZM63	59 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	ZNF818P	Q6ZRF7	136 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243		Q86TA4	180 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SERP2	Q8N6R1	65 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	C4orf3	Q8WVX3	66 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	LINC00208	Q96KT6	92 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	MGST2	Q99735	147 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	CYP4F30P	Q9H0H9	118 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	NDUFA4L2	Q9NRX3	87 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	CACFD1	Q9UGQ2	172 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	SPCS1	Q9Y6A9	102 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	CDK13	Q14004	1512 aa	Known RBP	0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	TOP2B	Q02880	1626 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	PI4KA	P42356	2102 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	MAGI2	Q86UL8	1455 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	NRXN1	Q9ULB1	1477 aa		0.67	□□□□□ -2.3
UBR1-209	ENST00000569243	MED13L	Q71F56	2210 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	PSME4	Q14997	1843 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	MED12	Q93074	2177 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	DLG5	Q8TDM6	1919 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	RREB1	Q92766	1687 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	ABCC3	O15438	1527 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	TRGV2	A0A075B6R0	118 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.66	□□□□□ -2.3
UBR1-209	ENST00000569243		A0A087WTM6	91 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243		A0A1W2PPM0	123 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	HIGD1C	A8MV81	97 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243		H7BZZ5	65 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	HMGN4	O00479	90 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	ELOF1	P60002	83 aa	Known RBP	0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	SPAG11B	Q08648	103 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	WFDC2	Q14508	124 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	PMCHL1	Q16048	86 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	SPAG11A	Q6PDA7	123 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	C5orf56	Q8N8D9	126 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	FDCSP	Q8NFU4	85 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	COX7B2	Q8TF08	81 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	FAM167A-AS1	Q96KT0	104 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	S100A13	Q99584	98 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	TRGV9	Q99603	122 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	UQCR10	Q9UDW1	63 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	PRO1854	Q9UHT4	67 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243		V9GYH0	126 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	MYO7A	Q13402	2215 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	EXPH5	Q8NEV8	1989 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	NWD2	Q9ULI1	1742 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	MRC1	P22897	1456 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	MLH3	Q9UHC1	1453 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	ARFGEF1	Q9Y6D6	1849 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	DIP2B	Q9P265	1576 aa		0.66	□□□□□ -2.3
UBR1-209	ENST00000569243	CEP162	Q5TB80	1403 aa		0.65	□□□□□ -2.3
UBR1-209	ENST00000569243	TANC1	Q9C0D5	1861 aa		0.65	□□□□□ -2.3
UBR1-209	ENST00000569243	ARHGEF12	Q9NZN5	1544 aa		0.65	□□□□□ -2.31
UBR1-209	ENST00000569243	NRXN2	Q9P2S2	1712 aa		0.65	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms