RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 OR2D3Q8NGH3 330 aa9.69□□□□□ -0.86
PKD1-236ENST00000568796 LYPD6BQ8NI32 183 aa9.69□□□□□ -0.86
PKD1-236ENST00000568796 G3V3Q6 166 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 NDUFS6O75380 124 aaKnown RBP9.68□□□□□ -0.86
PKD1-236ENST00000568796 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
PKD1-236ENST00000568796 COTL1Q14019 142 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 STPG4Q8N801 248 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 PRSS3P2Q8NHM4 247 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
PKD1-236ENST00000568796 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
PKD1-236ENST00000568796 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
PKD1-236ENST00000568796 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
PKD1-236ENST00000568796 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
PKD1-236ENST00000568796 SMLR1H3BR10 107 aa9.66□□□□□ -0.86
PKD1-236ENST00000568796 CENPWQ5EE01 88 aa9.66□□□□□ -0.86
PKD1-236ENST00000568796 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
PKD1-236ENST00000568796 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
PKD1-236ENST00000568796 Q6ZNX1 250 aa9.65□□□□□ -0.86
PKD1-236ENST00000568796 F2Z2F3 143 aa9.64□□□□□ -0.87
PKD1-236ENST00000568796 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
PKD1-236ENST00000568796 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
PKD1-236ENST00000568796 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
PKD1-236ENST00000568796 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
PKD1-236ENST00000568796 IFNA1P01562 189 aa9.63□□□□□ -0.87
PKD1-236ENST00000568796 NTF3P20783 257 aa9.63□□□□□ -0.87
PKD1-236ENST00000568796 A0A096LNI7 61 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 RAB19A4D1S5 217 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 GNG4P50150 75 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 MANBALQ9NQG1 85 aa9.62□□□□□ -0.87
PKD1-236ENST00000568796 KANTRA0A1W2PQU2 76 aa9.61□□□□□ -0.87
PKD1-236ENST00000568796 CCL20P78556 96 aa9.61□□□□□ -0.87
PKD1-236ENST00000568796 TWIST1Q15672 202 aa9.61□□□□□ -0.87
PKD1-236ENST00000568796 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
PKD1-236ENST00000568796 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
PKD1-236ENST00000568796 TRAV26-2A0A0B4J265 109 aa9.6□□□□□ -0.87
PKD1-236ENST00000568796 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
PKD1-236ENST00000568796 ZNF345Q14585 488 aa9.6□□□□□ -0.87
PKD1-236ENST00000568796 SPINK6Q6UWN8 80 aa9.6□□□□□ -0.87
PKD1-236ENST00000568796 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
PKD1-236ENST00000568796 APCSP02743 223 aa9.59□□□□□ -0.87
PKD1-236ENST00000568796 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
PKD1-236ENST00000568796 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
PKD1-236ENST00000568796 BCL2L11O43521 198 aa9.58□□□□□ -0.88
PKD1-236ENST00000568796 XCL1P47992 114 aa9.58□□□□□ -0.88
PKD1-236ENST00000568796 EIF5AP63241 154 aaKnown RBP9.58□□□□□ -0.88
PKD1-236ENST00000568796 C9orf62Q8N4C0 152 aa9.58□□□□□ -0.88
PKD1-236ENST00000568796 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
PKD1-236ENST00000568796 FGF6P10767 208 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 KRTAP10-8P60410 259 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 FOXI1Q12951 378 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 Q6ZRP5 223 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
PKD1-236ENST00000568796 SMIM12Q96EX1 92 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 MED9Q9NWA0 146 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
PKD1-236ENST00000568796 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 NCR2O95944 276 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 CTRLP40313 264 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 NUDT10Q8NFP7 164 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
PKD1-236ENST00000568796 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 H7C423 109 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 CCL25O15444 150 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
PKD1-236ENST00000568796 PDE6DO43924 150 aa9.54□□□□□ -0.88
PKD1-236ENST00000568796 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
PKD1-236ENST00000568796 PMCHP20382 165 aa9.54□□□□□ -0.88
PKD1-236ENST00000568796 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
PKD1-236ENST00000568796 TRBV20OR9-2A0A075B6H5 130 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 A0A1B0GVG6 124 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 ZNF25P17030 456 aaPredicted RBP9.53□□□□□ -0.88
PKD1-236ENST00000568796 FOXA3P55318 350 aaPredicted RBP9.53□□□□□ -0.88
PKD1-236ENST00000568796 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
PKD1-236ENST00000568796 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
PKD1-236ENST00000568796 RPP21Q9H633 154 aaKnown RBP9.53□□□□□ -0.88
PKD1-236ENST00000568796 SYCNQ0VAF6 134 aa9.52□□□□□ -0.89
PKD1-236ENST00000568796 SS18Q15532 418 aa9.52□□□□□ -0.89
PKD1-236ENST00000568796 CNFNQ9BYD5 112 aa9.52□□□□□ -0.89
PKD1-236ENST00000568796 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
PKD1-236ENST00000568796 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
PKD1-236ENST00000568796 I3L3M4 83 aa9.51□□□□□ -0.89
PKD1-236ENST00000568796 TEX261Q6UWH6 196 aa9.51□□□□□ -0.89
PKD1-236ENST00000568796 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
PKD1-236ENST00000568796 BCL2P10415 239 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms