RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 NIT1Q86X76 327 aa9.22□□□□□ -0.93
SPG7-207ENST00000563218 NRACQ8N912 160 aa9.22□□□□□ -0.93
SPG7-207ENST00000563218 CIDEAO60543 219 aa9.21□□□□□ -0.94
SPG7-207ENST00000563218 CCL18P55774 89 aa9.21□□□□□ -0.94
SPG7-207ENST00000563218 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
SPG7-207ENST00000563218 HIST3H2BBQ8N257 126 aa9.21□□□□□ -0.94
SPG7-207ENST00000563218 RPL39LQ96EH5 51 aaKnown RBP9.21□□□□□ -0.94
SPG7-207ENST00000563218 A0A0J9YY99 117 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 M0QY20 66 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 NUPR1O60356 82 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 HSBP1O75506 76 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 IGHV3-53P01767 116 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 LINC00614P0C842 121 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 ESDP10768 282 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■□□□ 12.3
SPG7-207ENST00000563218 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
SPG7-207ENST00000563218 LINC00310P59036 64 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
SPG7-207ENST00000563218 C12orf57Q99622 126 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 Q9H8V8 135 aa9.2□□□□□ -0.94
SPG7-207ENST00000563218 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
SPG7-207ENST00000563218 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 PRSS47A8MTI9 375 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 PMCHP20382 165 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
SPG7-207ENST00000563218 LINC00612Q8N6U2 182 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 TMEM18Q96B42 140 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 ZNF479Q96JC4 524 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
SPG7-207ENST00000563218 TRBV6-5A0A0K0K1A5 114 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 ESRGQ1W209 222 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 Q8N8P6 123 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 C18orf15Q96N68 181 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
SPG7-207ENST00000563218 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
SPG7-207ENST00000563218 FABP4P15090 132 aa9.17□□□□□ -0.94
SPG7-207ENST00000563218 AMTP48728 403 aa9.17□□□□□ -0.94
SPG7-207ENST00000563218 S100A12P80511 92 aa9.17□□□□□ -0.94
SPG7-207ENST00000563218 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
SPG7-207ENST00000563218 Q6ZSN1 163 aa9.16□□□□□ -0.94
SPG7-207ENST00000563218 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
SPG7-207ENST00000563218 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
SPG7-207ENST00000563218 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
SPG7-207ENST00000563218 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
SPG7-207ENST00000563218 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 IFITM10A6NMD0 228 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 K7EQD1 137 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 VCYO14598 125 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 FAM19A2Q8N3H0 131 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
SPG7-207ENST00000563218 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.94
SPG7-207ENST00000563218 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 POLR2KP53803 58 aaKnown RBP9.14□□□□□ -0.95
SPG7-207ENST00000563218 FHL2Q14192 279 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
SPG7-207ENST00000563218 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
SPG7-207ENST00000563218 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
SPG7-207ENST00000563218 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 K7EMI3 77 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
SPG7-207ENST00000563218 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 TCAPO15273 167 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 BTF3P20290 206 aaKnown RBP9.12□□□□□ -0.95
SPG7-207ENST00000563218 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
SPG7-207ENST00000563218 LAGE3Q14657 143 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 RHOHQ15669 191 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 NEGR1Q7Z3B1 354 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
SPG7-207ENST00000563218 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
SPG7-207ENST00000563218 A0A096LPF7 62 aa9.11□□□□□ -0.95
SPG7-207ENST00000563218 I3L3M4 83 aa9.11□□□□□ -0.95
SPG7-207ENST00000563218 HBDP02042 147 aa9.11□□□□□ -0.95
SPG7-207ENST00000563218 FCER1GP30273 86 aa9.11□□□□□ -0.95
SPG7-207ENST00000563218 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
SPG7-207ENST00000563218 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
SPG7-207ENST00000563218 LEPROTL1O95214 131 aa9.1□□□□□ -0.95
SPG7-207ENST00000563218 Q9UF83 564 aa9.1□□□□□ -0.95
SPG7-207ENST00000563218 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
SPG7-207ENST00000563218 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 EPM2AB3EWF7 344 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 G0S2P27469 103 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 CRYBA4P53673 196 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 XGP55808 180 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 GAGE1Q13065 139 aa9.09□□□□□ -0.95
SPG7-207ENST00000563218 GAGE4Q13068 117 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms