RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 F5P12259 2224 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 SPEGQ15772 3267 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 TNRC6BQ9UPQ9 1833 aaKnown RBP6.7□□□□□ -1.34
CDH1-205ENST00000562836 SEC16AO15027 2179 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 SOCS3O14543 225 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 CCL4P13236 92 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 MRPS21P82921 87 aaKnown RBP6.69□□□□□ -1.34
CDH1-205ENST00000562836 C10orf128Q5T292 105 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 ZNRF1Q8ND25 227 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 IGHV1OR15-1A0A075B7D0 117 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 EIF4EBP1Q13541 118 aaPredicted RBP6.69□□□□□ -1.34
CDH1-205ENST00000562836 Q8IYB0 196 aa6.69□□□□□ -1.34
CDH1-205ENST00000562836 LEPROTO15243 131 aa6.68□□□□□ -1.34
CDH1-205ENST00000562836 NCR3O14931 201 aa6.68□□□□□ -1.34
CDH1-205ENST00000562836 PRB3Q04118 309 aaPredicted RBP6.68□□□□□ -1.34
CDH1-205ENST00000562836 LITAFQ99732 161 aa6.68□□□□□ -1.34
CDH1-205ENST00000562836 TRGV8A0A0C4DH27 118 aa6.67□□□□□ -1.34
CDH1-205ENST00000562836 ASCC3Q8N3C0 2202 aaKnown RBP6.67□□□□□ -1.34
CDH1-205ENST00000562836 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
CDH1-205ENST00000562836 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
CDH1-205ENST00000562836 BSPH1Q075Z2 132 aa6.67□□□□□ -1.34
CDH1-205ENST00000562836 PLA2G2CQ5R387 149 aa6.67□□□□□ -1.34
CDH1-205ENST00000562836 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
CDH1-205ENST00000562836 IGLV3-9A0A075B6K5 115 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 SMIM2Q9BVW6 85 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 TNCP24821 2201 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 A0A0J9YXV3 536 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 KNL1Q8NG31 2342 aa6.66□□□□□ -1.34
CDH1-205ENST00000562836 IGHV3-48P01763 117 aa6.65□□□□□ -1.34
CDH1-205ENST00000562836 SPINK2P20155 84 aa6.65□□□□□ -1.34
CDH1-205ENST00000562836 A6NED7 52 aa6.65□□□□□ -1.35
CDH1-205ENST00000562836 PRB2P02812 416 aaPredicted RBP6.65□□□□□ -1.35
CDH1-205ENST00000562836 TRGV3P03979 118 aa6.65□□□□□ -1.35
CDH1-205ENST00000562836 NREPQ16612 68 aa6.65□□□□□ -1.35
CDH1-205ENST00000562836 FAM27BQ5VT28 67 aa6.65□□□□□ -1.35
CDH1-205ENST00000562836 IGHV3-20A0A0C4DH32 117 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 PSCAO43653 123 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 MOBPQ13875 183 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 MIAQ16674 131 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 TSHBP01222 138 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 OBSCN-AS1Q96MR7 158 aa6.64□□□□□ -1.35
CDH1-205ENST00000562836 TRBV6-1A0A0K0K1D8 114 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 IGHV6-1A0A0B4J1U7 121 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 A0A0J9YX75 114 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 MGAQ8IWI9 3026 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
CDH1-205ENST00000562836 TNP2Q05952 138 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 TMEM14CQ9P0S9 112 aa6.63□□□□□ -1.35
CDH1-205ENST00000562836 BRWD1Q9NSI6 2320 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 LAMA1P25391 3075 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 LINC01565O15544 149 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
CDH1-205ENST00000562836 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 SORL1Q92673 2214 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 Q8N3U1 123 aa6.62□□□□□ -1.35
CDH1-205ENST00000562836 DEFB108AA8MXU0 73 aa6.61□□□□□ -1.35
CDH1-205ENST00000562836 DEFB133Q30KQ1 61 aa6.61□□□□□ -1.35
CDH1-205ENST00000562836 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
CDH1-205ENST00000562836 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
CDH1-205ENST00000562836 CTSGP08311 255 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 SDK1Q7Z5N4 2213 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 IGHV3-43A0A0B4J1X8 118 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 IGHV3-43DP0DP04 118 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 MALRD1Q5VYJ5 2156 aa6.6□□□□□ -1.35
CDH1-205ENST00000562836 GYPEP15421 78 aa6.59□□□□□ -1.35
CDH1-205ENST00000562836 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
CDH1-205ENST00000562836 HAMPP81172 84 aa6.59□□□□□ -1.35
CDH1-205ENST00000562836 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
CDH1-205ENST00000562836 ZNF32P17041 273 aa6.59□□□□□ -1.35
CDH1-205ENST00000562836 CNFNQ9BYD5 112 aa6.59□□□□□ -1.35
CDH1-205ENST00000562836 MUC3AQ02505 3323 aa6.59□□□□□ -1.36
CDH1-205ENST00000562836 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 ZNF833PQ6ZTB9 187 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 FGF23Q9GZV9 251 aaPredicted RBP6.58□□□□□ -1.36
CDH1-205ENST00000562836 TNRC18O15417 2968 aaPredicted RBP6.58□□□□□ -1.36
CDH1-205ENST00000562836 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 IGHV3-15A0A0B4J1V0 119 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 INAFM1C9JVW0 142 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 Q75L30 129 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 DEFB126Q9BYW3 111 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 CDC42SE1Q9NRR8 79 aa6.58□□□□□ -1.36
CDH1-205ENST00000562836 IGKV1D-37A0A075B6S9 117 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 IGHV3-30-3P0DP02 117 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 IGHV1-8P0DP01 117 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 RPL39P62891 51 aaKnown RBP6.57□□□□□ -1.36
CDH1-205ENST00000562836 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 Q6ZTI0 123 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 RPL39LQ96EH5 51 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms