RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 XKRY2A2RUG3 117 aa10.46□□□□□ -0.73
CMTM3-205ENST00000562707 F2Z2F3 143 aa10.46□□□□□ -0.73
CMTM3-205ENST00000562707 NDUFS6O75380 124 aaKnown RBP10.46□□□□□ -0.73
CMTM3-205ENST00000562707 MAJINQ3KP22 176 aa10.46□□□□□ -0.73
CMTM3-205ENST00000562707 CENPWQ5EE01 88 aa10.45□□□□□ -0.74
CMTM3-205ENST00000562707 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
CMTM3-205ENST00000562707 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
CMTM3-205ENST00000562707 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
CMTM3-205ENST00000562707 ZNF345Q14585 488 aa10.44□□□□□ -0.74
CMTM3-205ENST00000562707 C11orf52Q96A22 123 aa10.44□□□□□ -0.74
CMTM3-205ENST00000562707 MANBALQ9NQG1 85 aa10.44□□□□□ -0.74
CMTM3-205ENST00000562707 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 SMLR1H3BR10 107 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 IFNA1P01562 189 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 STPG4Q8N801 248 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 GNG13Q9P2W3 67 aa10.43□□□□□ -0.74
CMTM3-205ENST00000562707 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 C19orf71A6NCJ1 209 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 NTF3P20783 257 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 EIF5AP63241 154 aaKnown RBP10.42□□□□□ -0.74
CMTM3-205ENST00000562707 PRR3P79522 188 aaKnown RBP10.42□□□□□ -0.74
CMTM3-205ENST00000562707 AMMECR1LQ6DCA0 310 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 LYZL1Q6UWQ5 148 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
CMTM3-205ENST00000562707 TNXBP22105 4242 aa10.41□□□□□ -0.74
CMTM3-205ENST00000562707 GNG4P50150 75 aa10.41□□□□□ -0.74
CMTM3-205ENST00000562707 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
CMTM3-205ENST00000562707 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
CMTM3-205ENST00000562707 LRP2P98164 4655 aa10.4□□□□□ -0.74
CMTM3-205ENST00000562707 RAB19A4D1S5 217 aa10.4□□□□□ -0.74
CMTM3-205ENST00000562707 CCL20P78556 96 aa10.4□□□□□ -0.74
CMTM3-205ENST00000562707 BIN3Q9NQY0 253 aa10.4□□□□□ -0.74
CMTM3-205ENST00000562707 BCL2L11O43521 198 aa10.39□□□□□ -0.75
CMTM3-205ENST00000562707 TWIST1Q15672 202 aa10.39□□□□□ -0.75
CMTM3-205ENST00000562707 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
CMTM3-205ENST00000562707 C9orf62Q8N4C0 152 aa10.39□□□□□ -0.75
CMTM3-205ENST00000562707 LINC00474Q9P2X8 69 aa10.39□□□□□ -0.75
CMTM3-205ENST00000562707 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-205ENST00000562707 A0A0J9YXV3 536 aa10.38□□□□□ -0.75
CMTM3-205ENST00000562707 HMSDA8MTL9 139 aa10.38□□□□□ -0.75
CMTM3-205ENST00000562707 TEX46H3BTG2 121 aa10.38□□□□□ -0.75
CMTM3-205ENST00000562707 REG3GQ6UW15 175 aa10.38□□□□□ -0.75
CMTM3-205ENST00000562707 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
CMTM3-205ENST00000562707 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 H7C423 109 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 NCR2O95944 276 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 MED9Q9NWA0 146 aa10.37□□□□□ -0.75
CMTM3-205ENST00000562707 A0A096LNI7 61 aa10.36□□□□□ -0.75
CMTM3-205ENST00000562707 PDE6DO43924 150 aa10.36□□□□□ -0.75
CMTM3-205ENST00000562707 CTRLP40313 264 aa10.36□□□□□ -0.75
CMTM3-205ENST00000562707 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.35□□□□□ -0.75
CMTM3-205ENST00000562707 TRAV26-2A0A0B4J265 109 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 IGKV2-29A2NJV5 120 aaPredicted RBP10.35□□□□□ -0.75
CMTM3-205ENST00000562707 APCSP02743 223 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 FGF6P10767 208 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 ODF1Q14990 250 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 Q6ZNX1 250 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 SMIM15Q7Z3B0 74 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 NUDT10Q8NFP7 164 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 NUDT11Q96G61 164 aa10.35□□□□□ -0.75
CMTM3-205ENST00000562707 MEF2BQ02080 365 aaPredicted RBP10.34□□□□□ -0.75
CMTM3-205ENST00000562707 FOXI1Q12951 378 aa10.34□□□□□ -0.75
CMTM3-205ENST00000562707 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
CMTM3-205ENST00000562707 BTF3L4Q96K17 158 aa10.34□□□□□ -0.75
CMTM3-205ENST00000562707 CNFNQ9BYD5 112 aa10.34□□□□□ -0.75
CMTM3-205ENST00000562707 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-205ENST00000562707 XCL1P47992 114 aa10.33□□□□□ -0.76
CMTM3-205ENST00000562707 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
CMTM3-205ENST00000562707 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
CMTM3-205ENST00000562707 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 IGHV1-58A0A0C4DH39 117 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 PMCHP20382 165 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 EIF5AL1Q6IS14 154 aaKnown RBP10.32□□□□□ -0.76
CMTM3-205ENST00000562707 TEX261Q6UWH6 196 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 Q6ZRP5 223 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
CMTM3-205ENST00000562707 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
CMTM3-205ENST00000562707 CCL25O15444 150 aa10.31□□□□□ -0.76
CMTM3-205ENST00000562707 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
CMTM3-205ENST00000562707 RPP21Q9H633 154 aaKnown RBP10.31□□□□□ -0.76
CMTM3-205ENST00000562707 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
CMTM3-205ENST00000562707 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
CMTM3-205ENST00000562707 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
CMTM3-205ENST00000562707 I3L3M4 83 aa10.29□□□□□ -0.76
CMTM3-205ENST00000562707 SS18Q15532 418 aa10.29□□□□□ -0.76
CMTM3-205ENST00000562707 RNASE7Q9H1E1 156 aaKnown RBP10.29□□□□□ -0.76
CMTM3-205ENST00000562707 RNF213Q63HN8 5207 aa10.29□□□□□ -0.76
CMTM3-205ENST00000562707 BCL2P10415 239 aa10.28□□□□□ -0.76
CMTM3-205ENST00000562707 FOXA3P55318 350 aaPredicted RBP10.28□□□□□ -0.76
CMTM3-205ENST00000562707 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
CMTM3-205ENST00000562707 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
CMTM3-205ENST00000562707 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
CMTM3-205ENST00000562707 TAGLN2P37802 199 aaKnown RBP10.26□□□□□ -0.77
CMTM3-205ENST00000562707 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
CMTM3-205ENST00000562707 OCC1Q8TAD7 63 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms