RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 UFC1Q9Y3C8 167 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 IQCF6A8MYZ5 107 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 M0R378 163 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 GADD45GO95257 159 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 IFNA21P01568 189 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 IFNA17P01571 189 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 HMGN2P05204 90 aaKnown RBP1.95□□□□□ -2.1
SMG1-204ENST00000561940 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
SMG1-204ENST00000561940 G0S2P27469 103 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 SMIM20Q8N5G0 67 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 RASL12Q9NYN1 266 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 PCTPQ9UKL6 214 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 KLK9Q9UKQ9 250 aa1.95□□□□□ -2.1
SMG1-204ENST00000561940 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 RBP4P02753 201 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 ANGP03950 147 aaKnown RBP1.94□□□□□ -2.1
SMG1-204ENST00000561940 GUCA1AP43080 201 aaPredicted RBP1.94□□□□□ -2.1
SMG1-204ENST00000561940 COPZ1P61923 177 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 SNCBQ16143 134 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 OR2T2Q6IF00 324 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 SOSTDC1Q6X4U4 206 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 EXOC3-AS1Q8N2X6 119 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 C10orf111Q8N326 155 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 TMEM254Q8TBM7 123 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 HOPXQ9BPY8 73 aaPredicted RBP1.94□□□□□ -2.1
SMG1-204ENST00000561940 OR2H1Q9GZK4 316 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 NDUFAF1Q9Y375 327 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 HILPDAQ9Y5L2 63 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 APOBP04114 4563 aaKnown RBP1.94□□□□□ -2.1
SMG1-204ENST00000561940 VPS13DQ5THJ4 4388 aa1.94□□□□□ -2.1
SMG1-204ENST00000561940 FAT2Q9NYQ8 4349 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 OOSP1A8MZH6 123 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 MIF4GDA9UHW6 222 aaKnown RBP1.93□□□□□ -2.1
SMG1-204ENST00000561940 PPP5D1E7EU14 171 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
SMG1-204ENST00000561940 ARL14EPLP0DKL9 152 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 CROCCP2Q86T23 111 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 OR5AS1Q8N127 324 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 LRRC18Q8N456 261 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 FAM216BQ8N7L0 139 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 WFDC6Q9BQY6 131 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 NPCDR1Q9BY65 106 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 LAMTOR3Q9UHA4 124 aa1.93□□□□□ -2.1
SMG1-204ENST00000561940 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 TANC2Q9HCD6 1990 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 TRAV36DV7A0A075B6V5 113 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 A0A087WX48 190 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 TRAV10A0A0B4J240 114 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 PFDN1O60925 122 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 DHFRP00374 187 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 IDO1P14902 403 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 C10orf128Q5T292 105 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 NUP35Q8NFH5 326 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 OR2T35Q8NGX2 323 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 C1orf54Q8WWF1 131 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 DPY30Q9C005 99 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 ATPIF1Q9UII2 106 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 LY96Q9Y6Y9 160 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 DNAH2Q9P225 4427 aa1.92□□□□□ -2.1
SMG1-204ENST00000561940 PIAS1O75925 651 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 CRYBA4P53673 196 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 KRTAP10-4P60372 401 aaPredicted RBP1.91□□□□□ -2.1
SMG1-204ENST00000561940 UBE2DNLQ8IWF7 75 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 OR10K1Q8NGX5 313 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 GAFA1Q96PS6 74 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 LRP2P98164 4655 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
SMG1-204ENST00000561940 DNAH17Q9UFH2 4485 aa1.9□□□□□ -2.1
SMG1-204ENST00000561940 PKD1P98161 4303 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 NBDYA0A0U1RRE5 68 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 TRGC2P03986 189 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 DBIP07108 87 aaKnown RBP1.9□□□□□ -2.11
SMG1-204ENST00000561940 SCTP09683 121 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 C1orf137Q5JT78 98 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.9□□□□□ -2.11
SMG1-204ENST00000561940 PLEKHB2Q96CS7 222 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 C19orf12Q9NSK7 152 aa1.9□□□□□ -2.11
SMG1-204ENST00000561940 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
SMG1-204ENST00000561940 CCL3L1P16619 93 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 DEFB135Q30KP9 77 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 CLECL1Q8IZS7 167 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 FAM24BQ8N5W8 94 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 OR5D16Q8NGK9 328 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 ZNF714Q96N38 554 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 MRPL57Q9BQC6 102 aaKnown RBP1.89□□□□□ -2.11
SMG1-204ENST00000561940 RTL8AQ9BWD3 113 aa1.89□□□□□ -2.11
SMG1-204ENST00000561940 DNAH5Q8TE73 4624 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 DEFB131BA0A096LNP1 70 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 C17orf112F2Z3M2 114 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 H3BQF6 201 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 GEMIN2O14893 280 aaKnown RBP1.88□□□□□ -2.11
SMG1-204ENST00000561940 SMIM24O75264 130 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 FABP1P07148 127 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 OR10J4P0C629 311 aa1.88□□□□□ -2.11
SMG1-204ENST00000561940 ZNF93P35789 620 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 402.8 ms