RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
CTDSPL2-209ENST00000560620 NAT8BQ9UHF3 227 aa8.6□□□□□ -1.03
CTDSPL2-209ENST00000560620 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
CTDSPL2-209ENST00000560620 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
CTDSPL2-209ENST00000560620 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
CTDSPL2-209ENST00000560620 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
CTDSPL2-209ENST00000560620 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
CTDSPL2-209ENST00000560620 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
CTDSPL2-209ENST00000560620 PMCHP20382 165 aa8.58□□□□□ -1.04
CTDSPL2-209ENST00000560620 MIAQ16674 131 aa8.58□□□□□ -1.04
CTDSPL2-209ENST00000560620 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
CTDSPL2-209ENST00000560620 APCSP02743 223 aa8.57□□□□□ -1.04
CTDSPL2-209ENST00000560620 REG3AQ06141 175 aa8.57□□□□□ -1.04
CTDSPL2-209ENST00000560620 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
CTDSPL2-209ENST00000560620 AMN1Q8IY45 258 aa8.57□□□□□ -1.04
CTDSPL2-209ENST00000560620 ST20Q9HBF5 79 aa8.57□□□□□ -1.04
CTDSPL2-209ENST00000560620 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 RAB4AP20338 218 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 CAMPP49913 170 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
CTDSPL2-209ENST00000560620 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 IGKV3OR2-268A0A0C4DH90 116 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 I3L3M4 83 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 NCR2O95944 276 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
CTDSPL2-209ENST00000560620 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 IGKV2-29A2NJV5 120 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 GAS8-AS1O95177 125 aa8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 HAMPP81172 84 aa8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 Q8N1X5 172 aa8.54□□□□□ -1.04
CTDSPL2-209ENST00000560620 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 A0A1B0GW15 77 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 USP17L23D6RBM5 183 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 XGP55808 180 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
CTDSPL2-209ENST00000560620 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 PPP1R17O96001 155 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 S100A8P05109 93 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 FCER1GP30273 86 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
CTDSPL2-209ENST00000560620 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 F8W036 122 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 H7C423 109 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 FGF6P10767 208 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 CKS2P33552 79 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 HBBP68871 147 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 HSPG2P98160 4391 aa8.51□□□□□ -1.05
CTDSPL2-209ENST00000560620 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 VCYO14598 125 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 TSHBP01222 138 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
CTDSPL2-209ENST00000560620 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 SUMO2P61956 95 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
CTDSPL2-209ENST00000560620 C7orf77A4D0Y5 90 aa8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 FAM30AQ9NZY2 134 aa8.48□□□□□ -1.05
CTDSPL2-209ENST00000560620 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 GAGE12HA6NDE8 117 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 D6R8Y8 96 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 PRSS1P07477 247 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 NRACQ8N912 160 aa8.47□□□□□ -1.05
CTDSPL2-209ENST00000560620 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 ESDP10768 282 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 IFITM2Q01629 132 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 Q5VSD8 79 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 ATP5L2Q7Z4Y8 100 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-209ENST00000560620 A0A1B0GXF2 115 aa8.45□□□□□ -1.06
CTDSPL2-209ENST00000560620 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
CTDSPL2-209ENST00000560620 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms