RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 VCYO14598 125 aa14.24□□□□□ -0.13
SEMA4B-215ENST00000560089 CENPEQ02224 2701 aa14.24□□□□□ -0.13
SEMA4B-215ENST00000560089 LY6LH3BQJ8 138 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV1-8P0DP01 117 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 ZNF415Q09FC8 603 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 PRRC2AP48634 2157 aaKnown RBP14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 CSMD2Q7Z408 3487 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 A0A0J9YXV3 536 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 PRR9Q5T870 116 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 ZFAND3Q9H8U3 227 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 BAALC-AS2P0C853 105 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 INAFM2P0DMQ5 153 aa14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 POLR2KP53803 58 aaKnown RBP14.23□□□□□ -0.13
SEMA4B-215ENST00000560089 A0A087WVE0 104 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 NDUFB3O43676 98 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 FHL2Q14192 279 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 TMEM86BQ8N661 226 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 C9orf85Q96MD7 179 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 A0A1W2PPR1 153 aa14.22□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV3OR16-10A0A075B7F0 116 aa14.21□□□□□ -0.13
SEMA4B-215ENST00000560089 USP17L23D6RBM5 183 aa14.21□□□□□ -0.13
SEMA4B-215ENST00000560089 FANCD2OSQ96PS1 177 aa14.21□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV3-66A0A0C4DH42 116 aa14.21□□□□□ -0.14
SEMA4B-215ENST00000560089 IGHV1-69P01742 117 aa14.21□□□□□ -0.14
SEMA4B-215ENST00000560089 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
SEMA4B-215ENST00000560089 COX7A2LO14548 114 aa14.2□□□□□ -0.14
SEMA4B-215ENST00000560089 FAM208BQ5VWN6 2430 aa14.2□□□□□ -0.14
SEMA4B-215ENST00000560089 LOXP28300 417 aaPredicted RBP14.2□□□□□ -0.14
SEMA4B-215ENST00000560089 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 LYPD2Q6UXB3 125 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 NDUFA12Q9UI09 145 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 LRRK2Q5S007 2527 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 V9GYY9 64 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 C9orf47Q6ZRZ4 202 aa14.19□□□□□ -0.14
SEMA4B-215ENST00000560089 IGHV4OR15-8A0A075B7B6 117 aa14.18□□□□□ -0.14
SEMA4B-215ENST00000560089 A0A087WW49 117 aa14.18□□□□□ -0.14
SEMA4B-215ENST00000560089 CTSGP08311 255 aa14.18□□□□□ -0.14
SEMA4B-215ENST00000560089 NDUFC2-KCTD14E9PQ53 114 aa14.17□□□□□ -0.14
SEMA4B-215ENST00000560089 NDUFC2O95298 119 aa14.17□□□□□ -0.14
SEMA4B-215ENST00000560089 IGF1P05019 195 aa14.17□□□□□ -0.14
SEMA4B-215ENST00000560089 SPG11Q96JI7 2443 aa14.17□□□□□ -0.14
SEMA4B-215ENST00000560089 DOPEY1Q5JWR5 2465 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 IGHV3OR16-13A0A075B7E8 117 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 IGHV3-74A0A0B4J1X5 117 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 FAM236DA0A1B0GTK5 79 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 FAM236CP0DP71 79 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 SUMO4Q6EEV6 95 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 LINC01561Q8N1V8 128 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 F5H697 171 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 TMEM178BH3BS89 294 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 Q6JHZ5 121 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 CELSR2Q9HCU4 2923 aa14.16□□□□□ -0.14
SEMA4B-215ENST00000560089 BUB1B-PAK6H3BSN5 160 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 BUB3O43684 328 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 DNAL4O96015 105 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 FAM223AQ8IWN6 122 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 TMEM243Q9BU79 118 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 C22orf24Q9Y442 160 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 MED13LQ71F56 2210 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 C9orf139Q6ZV77 190 aa14.15□□□□□ -0.14
SEMA4B-215ENST00000560089 FAM223BA6NKX1 122 aa14.14□□□□□ -0.15
SEMA4B-215ENST00000560089 NXPH4O95158 308 aa14.14□□□□□ -0.15
SEMA4B-215ENST00000560089 TRAV21A0A0B4J279 112 aa14.14□□□□□ -0.15
SEMA4B-215ENST00000560089 IGLV1-47P01700 117 aa14.14□□□□□ -0.15
SEMA4B-215ENST00000560089 LINC00315P59091 139 aa14.14□□□□□ -0.15
SEMA4B-215ENST00000560089 TRAV12-2A0A075B6T6 113 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 BEAN1Q3B7T3 259 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 WFDC11Q8NEX6 87 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 TRBV27A0A0K0K1C4 114 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 GNRH2O43555 120 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 ZNF843Q8N446 348 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 RNF5Q99942 180 aa14.13□□□□□ -0.15
SEMA4B-215ENST00000560089 COX7A1P24310 79 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 PSMB8P28062 276 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 FAM222AQ5U5X8 452 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 MRPL53Q96EL3 112 aaKnown RBP14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 KIF25-AS1Q9Y6Z4 181 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 PRIMA1Q86XR5 153 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 SERP1Q9Y6X1 66 aa14.12□□□□□ -0.15
SEMA4B-215ENST00000560089 IGHV1-58A0A0C4DH39 117 aa14.11□□□□□ -0.15
SEMA4B-215ENST00000560089 UBR5O95071 2799 aaPredicted RBP14.11□□□□□ -0.15
SEMA4B-215ENST00000560089 NBR2O15453 112 aa14.11□□□□□ -0.15
SEMA4B-215ENST00000560089 MED14OSP0DP75 135 aa14.11□□□□□ -0.15
SEMA4B-215ENST00000560089 VMO1Q7Z5L0 202 aa14.11□□□□□ -0.15
SEMA4B-215ENST00000560089 A0A087WWL8 130 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 A8MZ25 164 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 RNASE3P12724 160 aaKnown RBP14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 CSMD1Q96PZ7 3565 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 IGLV4-3A0A075B6K6 122 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 C1orf195Q5TG92 126 aa14.1□□□□□ -0.15
SEMA4B-215ENST00000560089 CELSR1Q9NYQ6 3014 aa14.09□□□□□ -0.15
SEMA4B-215ENST00000560089 CLPSL1A2RUU4 121 aa14.09□□□□□ -0.15
SEMA4B-215ENST00000560089 C16orf92Q96LL3 132 aa14.09□□□□□ -0.15
SEMA4B-215ENST00000560089 EPM2AB3EWF7 344 aa14.08□□□□□ -0.16
SEMA4B-215ENST00000560089 ZFAND2AQ8N6M9 145 aa14.08□□□□□ -0.16
SEMA4B-215ENST00000560089 LINC00846Q9NV44 126 aa14.08□□□□□ -0.16
SEMA4B-215ENST00000560089 LENEPQ9Y5L5 61 aa14.08□□□□□ -0.16
SEMA4B-215ENST00000560089 Q8N2B8 174 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms