RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 APCSP02743 223 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 XGP55808 180 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 RPL23P62829 140 aaKnown RBP5.4□□□□□ -1.54
SNX1-207ENST00000559401 SRSF3P84103 164 aaKnown RBP5.4□□□□□ -1.54
SNX1-207ENST00000559401 REG3AQ06141 175 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 RIGQ13278 110 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 C14orf177Q52M58 125 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 AMMECR1LQ6DCA0 310 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 FRZBQ92765 325 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 ISOC2Q96AB3 205 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 TMEM70Q9BUB7 260 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 GFRA4Q9GZZ7 299 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 V9GYV3 84 aa5.4□□□□□ -1.54
SNX1-207ENST00000559401 IGKV3OR2-268A0A0C4DH90 116 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 FAM231BA6NCW3 169 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 SDHAF1A6NFY7 115 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
SNX1-207ENST00000559401 PMCHP20382 165 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 LINC01620Q4KN68 170 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 RNASEKQ6P5S7 137 aaKnown RBP5.39□□□□□ -1.55
SNX1-207ENST00000559401 NAT8BQ9UHF3 227 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
SNX1-207ENST00000559401 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.38□□□□□ -1.55
SNX1-207ENST00000559401 IGKV2-29A2NJV5 120 aaPredicted RBP5.38□□□□□ -1.55
SNX1-207ENST00000559401 NCR2O95944 276 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 RAB14P61106 215 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 AMN1Q8IY45 258 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 NUP35Q8NFH5 326 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 TMEM191AQ9H0A3 160 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 SMDT1Q9H4I9 107 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 ST20Q9HBF5 79 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 PRR34Q9NV39 138 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 DNAH5Q8TE73 4624 aa5.38□□□□□ -1.55
SNX1-207ENST00000559401 A0A1B0GUV1 79 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 I3L3M4 83 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 CAMPP49913 170 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 IFITM2Q01629 132 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 Q5VSD8 79 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 MRAP2Q96G30 205 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 TMEM242Q9NWH2 141 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
SNX1-207ENST00000559401 TRAV8-4A0A0B4J246 113 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 TRBV6-5A0A0K0K1A5 114 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 FGF6P10767 208 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 RAB4AP20338 218 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
SNX1-207ENST00000559401 MRPL54Q6P161 138 aaKnown RBP5.36□□□□□ -1.55
SNX1-207ENST00000559401 RNF185Q96GF1 192 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
SNX1-207ENST00000559401 SMIM27A0A1W2PRY6 76 aa5.35□□□□□ -1.55
SNX1-207ENST00000559401 hDV102S1A0JD36 115 aa5.35□□□□□ -1.55
SNX1-207ENST00000559401 H7C423 109 aa5.35□□□□□ -1.55
SNX1-207ENST00000559401 FCER1GP30273 86 aa5.35□□□□□ -1.55
SNX1-207ENST00000559401 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
SNX1-207ENST00000559401 A0A1B0GW15 77 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 PPP1R17O96001 155 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 TSHBP01222 138 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 S100A8P05109 93 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 PRSS1P07477 247 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 AP5S1Q9NUS5 200 aa5.34□□□□□ -1.55
SNX1-207ENST00000559401 HSPG2P98160 4391 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 C7orf77A4D0Y5 90 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 F8W036 122 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 VCYO14598 125 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 PPP1R2P9O14990 202 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
SNX1-207ENST00000559401 CKS2P33552 79 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
SNX1-207ENST00000559401 HBBP68871 147 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 NDUFA5Q16718 116 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 MRPL51Q4U2R6 128 aaKnown RBP5.33□□□□□ -1.56
SNX1-207ENST00000559401 FAM104BQ5XKR9 115 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 DGAT2L7PQ6IED9 249 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 Q6ZSA8 131 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 SCXQ7RTU7 201 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 CLRN3Q8NCR9 226 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
SNX1-207ENST00000559401 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
SNX1-207ENST00000559401 ESDP10768 282 aa5.32□□□□□ -1.56
SNX1-207ENST00000559401 POLR2KP53803 58 aaKnown RBP5.32□□□□□ -1.56
SNX1-207ENST00000559401 PNRC1Q12796 327 aaPredicted RBP5.32□□□□□ -1.56
SNX1-207ENST00000559401 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
SNX1-207ENST00000559401 NRACQ8N912 160 aa5.32□□□□□ -1.56
SNX1-207ENST00000559401 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
SNX1-207ENST00000559401 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
SNX1-207ENST00000559401 LINC00862A6NCI5 91 aa5.31□□□□□ -1.56
SNX1-207ENST00000559401 D6R8Y8 96 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms