RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 TRAV25A0A0B4J276 109 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 IGHV7-4-1A0A0J9YVY3 117 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 APOMO95445 188 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 TNP2Q05952 138 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 SPANXN1Q5VSR9 72 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 CFAP126Q5VTH2 177 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
USP3-212ENST00000559276 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 Q8TAT8 98 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 LINC00477Q96M19 166 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 METTL26Q96S19 204 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 SPAG8Q99932 426 aaPredicted RBP4.27□□□□□ -1.73
USP3-212ENST00000559276 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
USP3-212ENST00000559276 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 DPH3P1Q9H4G8 78 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
USP3-212ENST00000559276 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 K7ERJ3 54 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 SPRY2O43597 315 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 NXPH4O95158 308 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 UBE2D3P61077 147 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
USP3-212ENST00000559276 UBE2D2P62837 147 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 FOXI1Q12951 378 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 ERCC8Q13216 396 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 WFDC2Q14508 124 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 PPDPFLQ8WWR9 84 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 RNF183Q96D59 192 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 GTSF1LQ9H1H1 148 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 MAP6D1Q9H9H5 199 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 MSRB1Q9NZV6 116 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 U3KQE9 123 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
USP3-212ENST00000559276 NUPR2A6NF83 97 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 RPL35AP18077 110 aaKnown RBP4.25□□□□□ -1.73
USP3-212ENST00000559276 MALP21145 153 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 ASIPP42127 132 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 CKS1BP61024 79 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 RPL11P62913 178 aaKnown RBP4.25□□□□□ -1.73
USP3-212ENST00000559276 MORN3Q6PF18 240 aaPredicted RBP4.25□□□□□ -1.73
USP3-212ENST00000559276 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 APRG1Q8IVJ8 170 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 MAPKAPK5-AS1Q8N8E1 139 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 KIR2DL5BQ8NHK3 375 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 GLMPQ8WWB7 406 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 TIMM17AQ99595 171 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 AGPAT4-IT1Q9H0P7 198 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 UFC1Q9Y3C8 167 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
USP3-212ENST00000559276 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 K7EMT4 169 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 NDUFA4O00483 81 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 CRYBA4P53673 196 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 APOC4P55056 127 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 FXYD7P58549 80 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 OR10J6PQ8NGY7 276 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 PRADC1Q9BSG0 188 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 DAZ1Q9NQZ3 744 aaKnown RBP4.24□□□□□ -1.73
USP3-212ENST00000559276 PKD1P98161 4303 aa4.24□□□□□ -1.73
USP3-212ENST00000559276 AGRNO00468 2067 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 TRAV8-2A0A0B4J237 113 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 A0A0J9YX75 114 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 TRBV6-5A0A0K0K1A5 114 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 A8MWV9 139 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 GIG44P09565 113 aaPredicted RBP4.23□□□□□ -1.73
USP3-212ENST00000559276 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 NANOS2P60321 138 aaKnown RBP4.23□□□□□ -1.73
USP3-212ENST00000559276 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
USP3-212ENST00000559276 PMVKQ15126 192 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 RASL10AQ92737 203 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 SPANXDQ9BXN6 97 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 TTTY13Q9BZ97 58 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 PHLDA3Q9Y5J5 127 aa4.23□□□□□ -1.73
USP3-212ENST00000559276 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
USP3-212ENST00000559276 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
USP3-212ENST00000559276 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms