RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CST9LQ9H4G1 147 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
TPM1-212ENST00000558347 GIG44P09565 113 aaPredicted RBP7.42□□□□□ -1.22
TPM1-212ENST00000558347 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
TPM1-212ENST00000558347 Q6ZQT7 251 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 TRPT1Q86TN4 253 aaKnown RBP7.42□□□□□ -1.22
TPM1-212ENST00000558347 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
TPM1-212ENST00000558347 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 ERASQ7Z444 233 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 OR11H2Q8NH07 326 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
TPM1-212ENST00000558347 CEND1Q8N111 149 aa7.4□□□□□ -1.22
TPM1-212ENST00000558347 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
TPM1-212ENST00000558347 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
TPM1-212ENST00000558347 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
TPM1-212ENST00000558347 NUPR2A6NF83 97 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 H3BUT2 72 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 K7ERU9 68 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 DEFB4AO15263 64 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 IGKV3-20P01619 116 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 MGPP08493 103 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 FABP2P12104 132 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 GCSHP23434 173 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 CEMP1Q6PRD7 247 aaPredicted RBP7.39□□□□□ -1.23
TPM1-212ENST00000558347 FAM159AQ6UWV7 190 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 C14orf178Q8N769 122 aaPredicted RBP7.39□□□□□ -1.23
TPM1-212ENST00000558347 MUC4Q99102 2169 aa7.39□□□□□ -1.23
TPM1-212ENST00000558347 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
TPM1-212ENST00000558347 J3KRW8 73 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 GNRH2O43555 120 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 FXYD2P54710 66 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 TCTAP57738 103 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 LINC00315P59091 139 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
TPM1-212ENST00000558347 SPINK13Q1W4C9 94 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 MORN3Q6PF18 240 aaPredicted RBP7.38□□□□□ -1.23
TPM1-212ENST00000558347 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
TPM1-212ENST00000558347 LINC00476Q8WZB0 136 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 RPL39LQ96EH5 51 aaKnown RBP7.38□□□□□ -1.23
TPM1-212ENST00000558347 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 FRAS1Q86XX4 4008 aa7.38□□□□□ -1.23
TPM1-212ENST00000558347 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 Q8NAQ8 132 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 CSNK1G2-AS1Q8NCQ2 148 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 CYSLTR1Q9Y271 337 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 X6R8D5 127 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 MYMXA0A1B0GTQ4 84 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 E9PLD3 99 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 VCYO14598 125 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 POLR2KP53803 58 aaKnown RBP7.37□□□□□ -1.23
TPM1-212ENST00000558347 SYT8Q8NBV8 401 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 C11orf45Q8TAV5 145 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
TPM1-212ENST00000558347 TRAV12-2A0A075B6T6 113 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 TRAV12-3A0A0B4J271 114 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 IGHV4-28A0A0C4DH34 117 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 RBMY1A1P0DJD3 496 aaKnown RBP7.36□□□□□ -1.23
TPM1-212ENST00000558347 RBMY1CP0DJD4 496 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 RBMY1FQ15415 496 aaKnown RBP7.36□□□□□ -1.23
TPM1-212ENST00000558347 MAPKAPK5-AS1Q8N8E1 139 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 RAB37Q96AX2 223 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 LINC00467Q9BRT7 94 aa7.36□□□□□ -1.23
TPM1-212ENST00000558347 KLK5Q9Y337 293 aaPredicted RBP7.36□□□□□ -1.23
TPM1-212ENST00000558347 TRBV7-3A0A075B6L6 115 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 IGHV3-16A0A0C4DH30 117 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 LY6G6CO95867 125 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 INSP01308 110 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 NEGR1Q7Z3B1 354 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 XCL2Q9UBD3 114 aa7.35□□□□□ -1.23
TPM1-212ENST00000558347 IGHV1OR15-1A0A075B7D0 117 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 MIFP14174 115 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 PCP4P48539 62 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 HERVK_113P61574 105 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 RHOHQ15669 191 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 ZFP2Q6ZN57 461 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 HIST1H4GQ99525 98 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 C1QTNF4Q9BXJ3 329 aa7.34□□□□□ -1.23
TPM1-212ENST00000558347 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
TPM1-212ENST00000558347 PMVKQ15126 192 aa7.33□□□□□ -1.24
TPM1-212ENST00000558347 RNF151Q2KHN1 245 aa7.33□□□□□ -1.24
TPM1-212ENST00000558347 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
TPM1-212ENST00000558347 NHP2Q9NX24 153 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms