RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 STOML2Q9UJZ1 356 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 HIGD1AQ9Y241 93 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 NOP16Q9Y3C1 178 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 HLA-DRB4X5D2U9 266 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SBF2Q86WG5 1849 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SPEF2Q9C093 1822 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 VPS13BQ7Z7G8 4022 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 BIRC6Q9NR09 4857 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 ANK3Q12955 4377 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 MYO18BQ8IUG5 2567 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 LAMA1P25391 3075 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 DNAH1Q9P2D7 4330 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 MYH7P12883 1935 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 A0A0D9SFI3 127 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 PNMA8CA0A1B0GUJ8 204 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 J3KT08 172 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 J3QLW9 94 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 M0R2P5 195 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 DPM2O94777 84 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 FABP1P07148 127 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 PIRTP0C851 137 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 HIST1H1BP16401 226 aaKnown RBP-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 RRAS2P62070 204 aaPredicted RBP-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 PSPHP78330 225 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 TFAMQ00059 246 aaKnown RBP-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 CFAP126Q5VTH2 177 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 Q5VV11 94 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 NDUFA11Q86Y39 141 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 OR9Q1Q8NGQ5 310 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 PPP1R1CQ8WVI7 109 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 AIF1LQ9BQI0 150 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 TP53AIP1Q9HCN2 124 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 LINC00312Q9Y6C7 94 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 ADGRB1O14514 1584 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 RNF213Q63HN8 5207 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 ARAP2Q8WZ64 1704 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 NWD2Q9ULI1 1742 aa-0.38□□□□□ -2.47
FOXN3-216ENST00000557496 TRANK1O15050 2925 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 ERCC6L2Q5T890 1561 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 BICRAQ9NZM4 1560 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 UHRF1BP1LA0JNW5 1464 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 ARHGEF10O15013 1369 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 TRAV36DV7A0A075B6V5 113 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 FXYD6-FXYD2A0A087WZ82 144 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 TRAV2A0A0B4J234 112 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 E2F6O75461 281 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 FAM107AO95990 144 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 SPRR2AP35326 72 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 CCL18P55774 89 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 RPS28P62857 69 aaKnown RBP-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 S100A7L2Q5SY68 101 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 SAMD13Q5VXD3 122 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 TOMM20LQ6UXN7 152 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 OR8I2Q8N0Y5 310 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 TMEM35BQ8NCS4 154 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 SPTSSBQ8NFR3 76 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 SDF2Q99470 211 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 NPVFQ9HCQ7 196 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 CALML5Q9NZT1 146 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 ATPIF1Q9UII2 106 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 ERG28Q9UKR5 140 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 FMN2Q9NZ56 1722 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 RYR2Q92736 4967 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 CASKIN1Q8WXD9 1431 aa-0.39□□□□□ -2.47
FOXN3-216ENST00000557496 KIF21AQ7Z4S6 1674 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 MRC1P22897 1456 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 A0A0C4DFX4 3053 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 FOCADQ5VW36 1801 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 ROCK1Q13464 1354 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 TRBV20-1A0A075B6N2 111 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 TRBV6-1A0A0K0K1D8 114 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 A0A1B0GX51 115 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 FAM92AA1XBS5 289 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 LOC730098B7Z3J9 87 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 CCDC179H3BU77 68 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 M0R135 149 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 M0R2T5 61 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 PGRMC1O00264 195 aaKnown RBP-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 PIN1P1O15428 100 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 SMIM24O75264 130 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 SCTP09683 121 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 NBEAP1P0C6P0 100 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 IGLC6P0CF74 106 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 LINC00694P0DN24 101 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 CMPK1P30085 196 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 LSM3P62310 102 aaKnown RBP-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 HIST1H1AQ02539 215 aaPredicted RBP-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 BAGE3Q86Y29 109 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 TCTE3Q8IZS6 198 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 VSTM2AQ8TAG5 236 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 VPS25Q9BRG1 176 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 SPCS1Q9Y6A9 102 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 SACSQ9NZJ4 4579 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 ZNF609O15014 1411 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 ANKRD36A6QL64 1941 aa-0.4□□□□□ -2.47
FOXN3-216ENST00000557496 LRRC37A2A6NM11 1700 aa-0.41□□□□□ -2.47
FOXN3-216ENST00000557496 LRRC37A3O60309 1634 aa-0.41□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms