RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 HSPG2P98160 4391 aa11.86□□□□□ -0.51
XRCC3-217ENST00000556980 UBE2L6O14933 153 aa11.85□□□□□ -0.51
XRCC3-217ENST00000556980 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
XRCC3-217ENST00000556980 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
XRCC3-217ENST00000556980 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
XRCC3-217ENST00000556980 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
XRCC3-217ENST00000556980 V9GYV3 84 aa11.85□□□□□ -0.51
XRCC3-217ENST00000556980 XGP55808 180 aa11.84□□□□□ -0.51
XRCC3-217ENST00000556980 PRR34Q9NV39 138 aa11.84□□□□□ -0.51
XRCC3-217ENST00000556980 HLA-DQA1P01909 254 aa11.83□□□□□ -0.52
XRCC3-217ENST00000556980 TMEM70Q9BUB7 260 aa11.83□□□□□ -0.52
XRCC3-217ENST00000556980 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
XRCC3-217ENST00000556980 DNAH5Q8TE73 4624 aa11.82□□□□□ -0.52
XRCC3-217ENST00000556980 RIGQ13278 110 aa11.82□□□□□ -0.52
XRCC3-217ENST00000556980 TMEM191AQ9H0A3 160 aa11.82□□□□□ -0.52
XRCC3-217ENST00000556980 ABCA13Q86UQ4 5058 aa11.82□□□□□ -0.52
XRCC3-217ENST00000556980 REG3AQ06141 175 aa11.81□□□□□ -0.52
XRCC3-217ENST00000556980 C14orf177Q52M58 125 aa11.81□□□□□ -0.52
XRCC3-217ENST00000556980 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
XRCC3-217ENST00000556980 NAT8BQ9UHF3 227 aa11.81□□□□□ -0.52
XRCC3-217ENST00000556980 A0A1B0GUV1 79 aa11.8□□□□□ -0.52
XRCC3-217ENST00000556980 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
XRCC3-217ENST00000556980 NCR2O95944 276 aa11.8□□□□□ -0.52
XRCC3-217ENST00000556980 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
XRCC3-217ENST00000556980 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
XRCC3-217ENST00000556980 TRBV6-5A0A0K0K1A5 114 aa11.79□□□□□ -0.52
XRCC3-217ENST00000556980 APCSP02743 223 aa11.79□□□□□ -0.52
XRCC3-217ENST00000556980 HAMPP81172 84 aa11.79□□□□□ -0.52
XRCC3-217ENST00000556980 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
XRCC3-217ENST00000556980 EPM2AB3EWF7 344 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 USP17L23D6RBM5 183 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 PMCHP20382 165 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 RAB14P61106 215 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 ST20Q9HBF5 79 aa11.78□□□□□ -0.52
XRCC3-217ENST00000556980 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
XRCC3-217ENST00000556980 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
XRCC3-217ENST00000556980 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
XRCC3-217ENST00000556980 I3L3M4 83 aa11.77□□□□□ -0.53
XRCC3-217ENST00000556980 RAB4AP20338 218 aa11.77□□□□□ -0.53
XRCC3-217ENST00000556980 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
XRCC3-217ENST00000556980 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
XRCC3-217ENST00000556980 FAM30AQ9NZY2 134 aa11.76□□□□□ -0.53
XRCC3-217ENST00000556980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-217ENST00000556980 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-217ENST00000556980 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
XRCC3-217ENST00000556980 H7C423 109 aa11.74□□□□□ -0.53
XRCC3-217ENST00000556980 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
XRCC3-217ENST00000556980 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
XRCC3-217ENST00000556980 Q5VSD8 79 aa11.74□□□□□ -0.53
XRCC3-217ENST00000556980 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
XRCC3-217ENST00000556980 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
XRCC3-217ENST00000556980 A0A1B0GW15 77 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 SMKR1H3BMG3 65 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 PPP1R17O96001 155 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 TSHBP01222 138 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 FGF6P10767 208 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 CAMPP49913 170 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 Q6ZSA8 131 aa11.73□□□□□ -0.53
XRCC3-217ENST00000556980 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
XRCC3-217ENST00000556980 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.53
XRCC3-217ENST00000556980 PRSS1P07477 247 aa11.71□□□□□ -0.53
XRCC3-217ENST00000556980 ZNF25P17030 456 aaPredicted RBP11.71□□□□□ -0.53
XRCC3-217ENST00000556980 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
XRCC3-217ENST00000556980 FAM229AH3BQW9 127 aa11.7□□□□□ -0.54
XRCC3-217ENST00000556980 S100A8P05109 93 aa11.7□□□□□ -0.54
XRCC3-217ENST00000556980 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
XRCC3-217ENST00000556980 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
XRCC3-217ENST00000556980 MRPL54Q6P161 138 aaKnown RBP11.7□□□□□ -0.54
XRCC3-217ENST00000556980 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
XRCC3-217ENST00000556980 VCYO14598 125 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 PPP1R2P9O14990 202 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 FCER1GP30273 86 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 SUMO2P61956 95 aaKnown RBP11.69□□□□□ -0.54
XRCC3-217ENST00000556980 HBBP68871 147 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 MRPL51Q4U2R6 128 aaKnown RBP11.69□□□□□ -0.54
XRCC3-217ENST00000556980 NRACQ8N912 160 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 CLRN3Q8NCR9 226 aa11.69□□□□□ -0.54
XRCC3-217ENST00000556980 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
XRCC3-217ENST00000556980 F8W036 122 aa11.68□□□□□ -0.54
XRCC3-217ENST00000556980 ESDP10768 282 aa11.68□□□□□ -0.54
XRCC3-217ENST00000556980 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
XRCC3-217ENST00000556980 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
XRCC3-217ENST00000556980 hDV102S1A0JD36 115 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 LINC00862A6NCI5 91 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 CKS2P33552 79 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 PNRC1Q12796 327 aaPredicted RBP11.67□□□□□ -0.54
XRCC3-217ENST00000556980 CLLU1Q5K131 121 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
XRCC3-217ENST00000556980 A0A1B0GXF2 115 aa11.66□□□□□ -0.54
XRCC3-217ENST00000556980 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
XRCC3-217ENST00000556980 CHCHD10Q8WYQ3 142 aaPredicted RBP11.66□□□□□ -0.54
XRCC3-217ENST00000556980 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
XRCC3-217ENST00000556980 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
XRCC3-217ENST00000556980 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.54
XRCC3-217ENST00000556980 MT-ND4LP03901 98 aa11.64□□□□□ -0.55
XRCC3-217ENST00000556980 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms