RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RBMY1A1P0DJD3 496 aaKnown RBP11.83□□□□□ -0.52
TUBB3-209ENST00000555609 RBMY1CP0DJD4 496 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
TUBB3-209ENST00000555609 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 FBN2P35556 2912 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 DUX3Q96PT4 197 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 TIMM21Q9BVV7 248 aa11.83□□□□□ -0.52
TUBB3-209ENST00000555609 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
TUBB3-209ENST00000555609 A0A0J9YXY3 114 aa11.82□□□□□ -0.52
TUBB3-209ENST00000555609 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
TUBB3-209ENST00000555609 RNF183Q96D59 192 aa11.82□□□□□ -0.52
TUBB3-209ENST00000555609 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 INSL3P51460 131 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 BEAN1Q3B7T3 259 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 ZNF418Q8TF45 676 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-209ENST00000555609 LINC01600Q96MT4 127 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 POLQO75417 2590 aa11.81□□□□□ -0.52
TUBB3-209ENST00000555609 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 SPANXDQ9BXN6 97 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 SPANXCQ9NY87 97 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.522e-8■■□□□ 12
TUBB3-209ENST00000555609 IGHV4-31P0DP07 118 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
TUBB3-209ENST00000555609 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
TUBB3-209ENST00000555609 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
TUBB3-209ENST00000555609 TMEM262E9PQX1 116 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 TIMM17BO60830 172 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 SLURP1P55000 103 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
TUBB3-209ENST00000555609 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
TUBB3-209ENST00000555609 RS1O15537 224 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
TUBB3-209ENST00000555609 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 NRGNQ92686 78 aa11.78□□□□□ -0.52
TUBB3-209ENST00000555609 INSP01308 110 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 VSIG2Q96IQ7 327 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 YAE1D1Q9NRH1 226 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-209ENST00000555609 APCP25054 2843 aa11.77□□□□□ -0.53
TUBB3-209ENST00000555609 TIRAPP58753 221 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 C11orf72Q8NBR9 251 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 LINC01587Q99440 93 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 LITAFQ99732 161 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 SLC25A20O43772 301 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 NDUFA12Q9UI09 145 aa11.76□□□□□ -0.53
TUBB3-209ENST00000555609 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
TUBB3-209ENST00000555609 EIF4EBP3O60516 100 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-209ENST00000555609 IFITM1P13164 125 aa11.75□□□□□ -0.53
TUBB3-209ENST00000555609 HTN1P15515 57 aa11.75□□□□□ -0.53
TUBB3-209ENST00000555609 PROK1P58294 105 aa11.75□□□□□ -0.53
TUBB3-209ENST00000555609 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 MIAQ16674 131 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
TUBB3-209ENST00000555609 CYSRT1A8MQ03 144 aa11.73□□□□□ -0.53
TUBB3-209ENST00000555609 Q6ZSN1 163 aa11.73□□□□□ -0.53
TUBB3-209ENST00000555609 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
TUBB3-209ENST00000555609 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
TUBB3-209ENST00000555609 Q1RN00 199 aa11.72□□□□□ -0.53
TUBB3-209ENST00000555609 C9JAW5 83 aa11.72□□□□□ -0.53
TUBB3-209ENST00000555609 DEFB136Q30KP8 78 aa11.72□□□□□ -0.53
TUBB3-209ENST00000555609 C18orf65Q6ZTR6 163 aa11.72□□□□□ -0.53
TUBB3-209ENST00000555609 COX6CP09669 75 aa11.71□□□□□ -0.53
TUBB3-209ENST00000555609 CKS1BP61024 79 aa11.71□□□□□ -0.53
TUBB3-209ENST00000555609 LINC01620Q4KN68 170 aa11.71□□□□□ -0.53
TUBB3-209ENST00000555609 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
TUBB3-209ENST00000555609 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.53
TUBB3-209ENST00000555609 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-209ENST00000555609 Q6ZUT4 128 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 TRBV10-2A0A0K0K1G8 114 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 NDUFA1O15239 70 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 PRSS2P07478 247 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 DEFB113Q30KQ7 82 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
TUBB3-209ENST00000555609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 TRBV10-1A0A0K0K1A3 114 aa11.69□□□□□ -0.54
TUBB3-209ENST00000555609 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 SPINK8P0C7L1 97 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 404 ms