RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-208ENST00000555462 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGHV3-30-3P0DP02 117 aa12.58□□□□□ -0.4
PPP4R3A-208ENST00000555462 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
PPP4R3A-208ENST00000555462 NBL1P41271 181 aa12.57□□□□□ -0.4
PPP4R3A-208ENST00000555462 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
PPP4R3A-208ENST00000555462 CCL19Q99731 98 aa12.57□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 DEFB131AP59861 70 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 C19orf54Q5BKX5 351 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 TRIAP1O43715 76 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 A0A0J9YXY3 114 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 TMEM223A0PJW6 202 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 PPP1R17O96001 155 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 C20orf203Q8NBC4 194 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 TIMM21Q9BVV7 248 aa12.56□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGHV4OR15-8A0A075B7B6 117 aa12.55□□□□□ -0.4
PPP4R3A-208ENST00000555462 A0A087WW49 117 aa12.55□□□□□ -0.4
PPP4R3A-208ENST00000555462 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
PPP4R3A-208ENST00000555462 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
PPP4R3A-208ENST00000555462 TMEM141Q96I45 108 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 A0A0J9YX75 114 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 CFHR3Q02985 330 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 TEX29Q8N6K0 151 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 TIMM17AQ99595 171 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 PIMREGQ9BSJ6 248 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 FLNAP21333 2647 aaKnown RBP12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 SLURP1P55000 103 aa12.54□□□□□ -0.4
PPP4R3A-208ENST00000555462 PAPPA-AS1Q5QFB9 102 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 A6NDX4 124 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 I3L3M4 83 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 SCGB1A1P11684 91 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 APCP25054 2843 aa12.53□□□□□ -0.4
PPP4R3A-208ENST00000555462 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.4
PPP4R3A-208ENST00000555462 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.4
PPP4R3A-208ENST00000555462 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.4
PPP4R3A-208ENST00000555462 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.41
PPP4R3A-208ENST00000555462 LEPROTO15243 131 aa12.51□□□□□ -0.41
PPP4R3A-208ENST00000555462 LINC01620Q4KN68 170 aa12.51□□□□□ -0.41
PPP4R3A-208ENST00000555462 C2orf82Q6UX34 121 aa12.51□□□□□ -0.41
PPP4R3A-208ENST00000555462 LGALS9O00182 355 aa12.51□□□□□ -0.41
PPP4R3A-208ENST00000555462 ITPR3Q14573 2671 aa12.51□□□□□ -0.41
PPP4R3A-208ENST00000555462 SNCGO76070 127 aa12.5□□□□□ -0.41
PPP4R3A-208ENST00000555462 LINC01619G3V211 115 aa12.5□□□□□ -0.41
PPP4R3A-208ENST00000555462 MSMBP08118 114 aa12.5□□□□□ -0.41
PPP4R3A-208ENST00000555462 TCTEX1D4Q5JR98 221 aa12.5□□□□□ -0.41
PPP4R3A-208ENST00000555462 TRAV13-1A0A0B4J241 112 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 LINC00467Q9BRT7 94 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 CDKN2A-AS1Q9UH64 79 aa12.49□□□□□ -0.41
PPP4R3A-208ENST00000555462 A0A1W2PRX2 142 aa12.48□□□□□ -0.41
PPP4R3A-208ENST00000555462 IGLV1-40P01703 118 aa12.48□□□□□ -0.41
PPP4R3A-208ENST00000555462 CCDC179H3BU77 68 aa12.48□□□□□ -0.41
PPP4R3A-208ENST00000555462 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
PPP4R3A-208ENST00000555462 LINC01587Q99440 93 aa12.48□□□□□ -0.41
PPP4R3A-208ENST00000555462 RS1O15537 224 aa12.47□□□□□ -0.41
PPP4R3A-208ENST00000555462 NXPH4O95158 308 aa12.47□□□□□ -0.41
PPP4R3A-208ENST00000555462 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
PPP4R3A-208ENST00000555462 C10orf105Q8TEF2 133 aa12.47□□□□□ -0.41
PPP4R3A-208ENST00000555462 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
PPP4R3A-208ENST00000555462 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.41
PPP4R3A-208ENST00000555462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
PPP4R3A-208ENST00000555462 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 K7EQG2 157 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 M0R2P5 195 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 ATXN8Q156A1 80 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 FAM104AQ969W3 186 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 PSMB8P28062 276 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 COX6A2Q02221 97 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 ICOSQ9Y6W8 199 aa12.45□□□□□ -0.42
PPP4R3A-208ENST00000555462 RBMY1BA6NDE4 496 aaKnown RBP12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 RBMY1EA6NEQ0 496 aaKnown RBP12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 RBMY1DP0C7P1 496 aaKnown RBP12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 H7C423 109 aa12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 TMEM61Q8N0U2 210 aa12.43□□□□□ -0.42
PPP4R3A-208ENST00000555462 H3BMM0 161 aa12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 TRBV6-5A0A0K0K1A5 114 aa12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 NHLRC4P0CG21 123 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 KLK9Q2XQG4 91 aa12.42□□□□□ -0.42
PPP4R3A-208ENST00000555462 PLA2G2AP14555 144 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms