RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
PRKCH-211ENST00000555082 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 IGHV3-30P01768 117 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 IGHV3-30-5P0DP03 117 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 HERVK_113P61574 105 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 DAZ1Q9NQZ3 744 aaKnown RBP7.34□□□□□ -1.23
PRKCH-211ENST00000555082 ERG28Q9UKR5 140 aa7.34□□□□□ -1.23
PRKCH-211ENST00000555082 TRAV2A0A0B4J234 112 aa7.34□□□□□ -1.24
PRKCH-211ENST00000555082 TRAV21A0A0B4J279 112 aa7.34□□□□□ -1.24
PRKCH-211ENST00000555082 B5MCH6 92 aa7.34□□□□□ -1.24
PRKCH-211ENST00000555082 ZNRF2Q8NHG8 242 aa7.34□□□□□ -1.24
PRKCH-211ENST00000555082 ZNF256Q9Y2P7 627 aaPredicted RBP7.34□□□□□ -1.24
PRKCH-211ENST00000555082 TENM1Q9UKZ4 2725 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 A4D1N5 150 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
PRKCH-211ENST00000555082 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 C10orf126Q8N4M7 172 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 C16orf95Q9H693 158 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 PRO1854Q9UHT4 67 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 SLC25A20O43772 301 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 RNASE3P12724 160 aaKnown RBP7.33□□□□□ -1.24
PRKCH-211ENST00000555082 NSUN5P1Q3KNT7 163 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 ZFAND6Q6FIF0 208 aa7.33□□□□□ -1.24
PRKCH-211ENST00000555082 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 PROK1P58294 105 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 PMVKQ15126 192 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 Q1RN00 199 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 LYRM7Q5U5X0 104 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 C4orf3Q8WVX3 66 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 J3QQQ9 107 aa7.32□□□□□ -1.24
PRKCH-211ENST00000555082 LGALS3P17931 250 aaKnown RBP7.32□□□□□ -1.24
PRKCH-211ENST00000555082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.32□□□□□ -1.24
PRKCH-211ENST00000555082 NTN5Q8WTR8 489 aaPredicted RBP7.32□□□□□ -1.24
PRKCH-211ENST00000555082 SUMO4Q6EEV6 95 aa7.31□□□□□ -1.24
PRKCH-211ENST00000555082 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
PRKCH-211ENST00000555082 MRPL53Q96EL3 112 aaKnown RBP7.31□□□□□ -1.24
PRKCH-211ENST00000555082 LINC00477Q96M19 166 aa7.31□□□□□ -1.24
PRKCH-211ENST00000555082 TRAV4A0A0B4J268 109 aa7.31□□□□□ -1.24
PRKCH-211ENST00000555082 MUSTN1Q8IVN3 82 aa7.31□□□□□ -1.24
PRKCH-211ENST00000555082 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 NDUFA7O95182 113 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 LINC00315P59091 139 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 CCL24O00175 119 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 SBSPONQ8IVN8 264 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 AMELXQ99217 191 aa7.3□□□□□ -1.24
PRKCH-211ENST00000555082 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
PRKCH-211ENST00000555082 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
PRKCH-211ENST00000555082 TRAV12-3A0A0B4J271 114 aa7.29□□□□□ -1.24
PRKCH-211ENST00000555082 K7EMT4 169 aa7.29□□□□□ -1.24
PRKCH-211ENST00000555082 NPC2P61916 151 aa7.29□□□□□ -1.24
PRKCH-211ENST00000555082 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
PRKCH-211ENST00000555082 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
PRKCH-211ENST00000555082 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 GAGE2EQ4V326 116 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 Q8N1Y9 231 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 GAGE2DQ9UEU5 116 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 CCDC179H3BU77 68 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 VCYO14598 125 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 OVOL1O14753 267 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 GAGE5Q13069 117 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 GAGE6Q13070 117 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 SPATA3Q8NHX4 192 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 VWFP04275 2813 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 SOCS3O14543 225 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 SNCGO76070 127 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 PRSS2P07478 247 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 TMEM263Q8WUH6 116 aaKnown RBP7.28□□□□□ -1.24
PRKCH-211ENST00000555082 CITED1Q99966 193 aa7.28□□□□□ -1.24
PRKCH-211ENST00000555082 FBN1P35555 2871 aaKnown RBP7.27□□□□□ -1.24
PRKCH-211ENST00000555082 TMEM262E9PQX1 116 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 LGALS9O00182 355 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 ZNF56Q15929 161 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 ZNF876PQ49A33 203 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 FAM159AQ6UWV7 190 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 LENEPQ9Y5L5 61 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 TRRAPQ9Y4A5 3859 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 TRAV12-2A0A075B6T6 113 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 RNASE13Q5GAN3 156 aaKnown RBP7.27□□□□□ -1.25
PRKCH-211ENST00000555082 VCX2Q9H322 139 aa7.27□□□□□ -1.25
PRKCH-211ENST00000555082 PPP1R17O96001 155 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 DCANP1Q8TF63 244 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 NDUFV3P56181 108 aaKnown RBP7.26□□□□□ -1.25
PRKCH-211ENST00000555082 LINC01620Q4KN68 170 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 TMEM61Q8N0U2 210 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 SPXQ9BT56 116 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 MDFICQ9P1T7 246 aa7.26□□□□□ -1.25
PRKCH-211ENST00000555082 TTC32Q5I0X7 151 aa7.25□□□□□ -1.25
PRKCH-211ENST00000555082 C3orf56Q8N813 242 aa7.25□□□□□ -1.25
PRKCH-211ENST00000555082 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
PRKCH-211ENST00000555082 C15orf53Q8NAA6 179 aa7.25□□□□□ -1.25
PRKCH-211ENST00000555082 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
PRKCH-211ENST00000555082 TRAV8-3A0A0A6YYJ7 113 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms