RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PKD1P98161 4303 aa4.25□□□□□ -1.73
FOXN3-205ENST00000553904 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 hDV102S1A0JD36 115 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 FAM231BA6NCW3 169 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 PPP1R17O96001 155 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 CEBPGP53567 150 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 SMAGPQ0VAQ4 97 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 CT83Q5H943 113 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 TMEM101Q96IK0 257 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 GFRA4Q9GZZ7 299 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 HERC2O95714 4834 aa4.24□□□□□ -1.73
FOXN3-205ENST00000553904 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 A0A1B0GUT8 65 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 ZNF727A8MUV8 499 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-205ENST00000553904 I3L3M4 83 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 OXTP01178 125 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 ZNF25P17030 456 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-205ENST00000553904 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
FOXN3-205ENST00000553904 RNASEKQ6P5S7 137 aaKnown RBP4.23□□□□□ -1.73
FOXN3-205ENST00000553904 ALKAL2Q6UX46 152 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 C20orf203Q8NBC4 194 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 LYPD6BQ8NI32 183 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 RNF185Q96GF1 192 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 SMIM7Q9BQ49 75 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
FOXN3-205ENST00000553904 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 K7EN84 100 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 APCSP02743 223 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
FOXN3-205ENST00000553904 RIGQ13278 110 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 SDIM1Q6ZPB5 146 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 TSKUQ8WUA8 353 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 TMEM191AQ9H0A3 160 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 ST20Q9HBF5 79 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
FOXN3-205ENST00000553904 TRAV26-2A0A0B4J265 109 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 TRBV6-5A0A0K0K1A5 114 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 HIGD1CA8MV81 97 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 VCYO14598 125 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 CCL25O15444 150 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 RPS10P46783 165 aaKnown RBP4.21□□□□□ -1.74
FOXN3-205ENST00000553904 SS18Q15532 418 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 TMEM241Q24JQ0 296 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 TMEM18Q96B42 140 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 MRAP2Q96G30 205 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 SMDT1Q9H4I9 107 aa4.21□□□□□ -1.74
FOXN3-205ENST00000553904 hCG_2014768A0A024R1R8 64 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 LINC00862A6NCI5 91 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 TCAPO15273 167 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 FGF6P10767 208 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 FCER1GP30273 86 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 PEA15Q15121 130 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 LINC01551Q86U37 167 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 CHCHD10Q8WYQ3 142 aaPredicted RBP4.2□□□□□ -1.74
FOXN3-205ENST00000553904 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
FOXN3-205ENST00000553904 KIR2DL4Q99706 377 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 LINC00474Q9P2X8 69 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 NAT8BQ9UHF3 227 aa4.2□□□□□ -1.74
FOXN3-205ENST00000553904 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.19□□□□□ -1.74
FOXN3-205ENST00000553904 A0A1B0GW15 77 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 IGKV2-29A2NJV5 120 aaPredicted RBP4.19□□□□□ -1.74
FOXN3-205ENST00000553904 PPP1R2P9O14990 202 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 S100A8P05109 93 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 SRP19P09132 144 aaKnown RBP4.19□□□□□ -1.74
FOXN3-205ENST00000553904 RAB4AP20338 218 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
FOXN3-205ENST00000553904 IGHV1-58A0A0C4DH39 117 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 LINC00959A0A1B0GUT2 108 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 C7orf77A4D0Y5 90 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 C1orf196B1AJZ1 125 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 F8W036 122 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 ZNF561-AS1K7EIQ3 104 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 ESDP10768 282 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 MALP21145 153 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 POLR2KP53803 58 aaKnown RBP4.18□□□□□ -1.74
FOXN3-205ENST00000553904 Q6ZRU5 148 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 MRPL52Q86TS9 123 aaKnown RBP4.18□□□□□ -1.74
FOXN3-205ENST00000553904 ZNF664Q8N3J9 261 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 NUP35Q8NFH5 326 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 ISOC2Q96AB3 205 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 NAT8Q9UHE5 227 aa4.18□□□□□ -1.74
FOXN3-205ENST00000553904 CSDC2Q9Y534 153 aaKnown RBP4.18□□□□□ -1.74
FOXN3-205ENST00000553904 A0A087WYN8 130 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 GVQW2A0A096LPI5 108 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms