RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 VCYO14598 125 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 SPRY2O43597 315 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 NUPR1O60356 82 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 AZU1P20160 251 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 BTF3P20290 206 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 NANOS2P60321 138 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 KRTDAPP60985 99 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 LAGE3Q14657 143 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 SUMO4Q6EEV6 95 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 ZFP2Q6ZN57 461 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 ZNF705AQ6ZN79 300 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 FAM19A2Q8N3H0 131 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 NRACQ8N912 160 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 OR4C5Q8NGB2 326 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 RNASE8Q8TDE3 154 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 RASL10AQ92737 203 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 DNAJC30Q96LL9 226 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 SMIM2Q9BVW6 85 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 NIT2Q9NQR4 276 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 KIF25-AS1Q9Y6Z4 181 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 MUC4Q99102 2169 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TRAV26-2A0A0B4J265 109 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TRAV4A0A0B4J268 109 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 IFITM10A6NMD0 228 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 RS1O15537 224 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 ATP5LO75964 103 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 NUDT3O95989 172 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 CRYGDP07320 174 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 FCER1GP30273 86 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 PMCHL1Q16048 86 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TMEM70Q9BUB7 260 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 MRPL16Q9NX20 251 aaKnown RBP5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TNFRSF18Q9Y5U5 241 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 DNAH5Q8TE73 4624 aa5.06□□□□□ -1.6
DEPDC4-208ENST00000549341 TRGV2A0A075B6R0 118 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 TEX48A0A1B0GUV7 120 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 LINC01546A6NGU7 62 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 IGLL5B9A064 214 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 M0R2N4 97 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 GIG44P09565 113 aaPredicted RBP5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 GATA1P15976 413 aaPredicted RBP5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 CFAP126Q5VTH2 177 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 Q6ZWC4 215 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 CSNK1G2-AS1Q8NCQ2 148 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 JPT2Q9H910 190 aa5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-208ENST00000549341 TRBV10-1A0A0K0K1A3 114 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 SDHAF1A6NFY7 115 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 LYRM9A8MSI8 78 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 HSBP1L1C9JCN9 74 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 I3L3M4 83 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 M0QY20 66 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 RTL8CO15255 209 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 MIFP14174 115 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 LINC00315P59091 139 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 SMAGPQ0VAQ4 97 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 RHOHQ15669 191 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 PYY3Q5JQD4 70 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 C11orf45Q8TAV5 145 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 URB1-AS1Q96HZ7 61 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 TP53TG1Q9Y2A0 90 aa5.04□□□□□ -1.6
DEPDC4-208ENST00000549341 MYCBP2O75592 4640 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 IGLV2-18A0A075B6J9 118 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 IGHV3-73A0A0B4J1V6 119 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 TRGV4A0A0C4DH28 118 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 TRBV27A0A0K0K1C4 114 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 GAGE12BA1L429 117 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 SYS1-DBNDD2H3BUS1 97 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 DEFB4AO15263 64 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 GAGE7O76087 117 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 C3orf79P0CE67 100 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 GAGE12FP0CL80 117 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 GAGE12GP0CL81 117 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 GAGE12IP0CL82 117 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 Q6ZN92 141 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 OR11H2Q8NH07 326 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 IFI27L1Q96BM0 104 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 RPL39LQ96EH5 51 aaKnown RBP5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 PRADC1Q9BSG0 188 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 CYSLTR1Q9Y271 337 aa5.03□□□□□ -1.6
DEPDC4-208ENST00000549341 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 K7EQD1 137 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 PRSS1P07477 247 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 EMP1P54849 157 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 TMEM97Q5BJF2 176 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 Q6ZTI0 123 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 C18orf15Q96N68 181 aa5.02□□□□□ -1.61
DEPDC4-208ENST00000549341 SCGB3A1Q96QR1 104 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms