RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
RAB5C-204ENST00000547517 IGKV2D-24A0A075B6R9 120 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 CRPP02741 224 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 MT-ND4LP03901 98 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 ANGP03950 147 aaKnown RBP7.87□□□□□ -1.15
RAB5C-204ENST00000547517 ADCYAP1P18509 176 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 RIGQ13278 110 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 COTL1Q14019 142 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 CDPF1Q6NVV7 123 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 ATRAIDQ6UW56 229 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 FRZBQ92765 325 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 RMI2Q96E14 147 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 TMEM243Q9BU79 118 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
RAB5C-204ENST00000547517 LECT2O14960 151 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 RBX1P62877 108 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 WFDC2Q14508 124 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 CLPSL2Q6UWE3 100 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 AMN1Q8IY45 258 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 Q8N814 137 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 TMEM191AQ9H0A3 160 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 HSPG2P98160 4391 aa7.86□□□□□ -1.15
RAB5C-204ENST00000547517 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 AMTP48728 403 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 Q0VG73 95 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 COX11Q9Y6N1 276 aa7.85□□□□□ -1.15
RAB5C-204ENST00000547517 IGLV5-52A0A0A0MRZ9 124 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 UBE2L6O14933 153 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 S100A8P05109 93 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 ENHOQ6UWT2 76 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 MAPKAPK5-AS1Q8N8E1 139 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 BAALCQ8WXS3 180 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 C1orf43Q9BWL3 253 aa7.84□□□□□ -1.15
RAB5C-204ENST00000547517 NCR2O95944 276 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 APCSP02743 223 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 RAB4AP20338 218 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
RAB5C-204ENST00000547517 CAMPP49913 170 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 S100A12P80511 92 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 PNRC1Q12796 327 aaPredicted RBP7.83□□□□□ -1.16
RAB5C-204ENST00000547517 LINC00269Q8N2A0 174 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 MRAP2Q96G30 205 aa7.83□□□□□ -1.16
RAB5C-204ENST00000547517 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.82□□□□□ -1.16
RAB5C-204ENST00000547517 TRBV6-5A0A0K0K1A5 114 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 SMKR1H3BMG3 65 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 S100A6P06703 90 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 MRPL54Q6P161 138 aaKnown RBP7.82□□□□□ -1.16
RAB5C-204ENST00000547517 CBLN2Q8IUK8 224 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
RAB5C-204ENST00000547517 ST20Q9HBF5 79 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 RPS10P5Q9NQ39 176 aa7.82□□□□□ -1.16
RAB5C-204ENST00000547517 IGLV4-60A0A075B6I1 120 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 C7orf77A4D0Y5 90 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 PMCHP20382 165 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 GCSHP23434 173 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 KRTAP10-1P60331 282 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 MIAQ16674 131 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 C20orf203Q8NBC4 194 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 TMEM70Q9BUB7 260 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 PRR34Q9NV39 138 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 TMEM242Q9NWH2 141 aa7.81□□□□□ -1.16
RAB5C-204ENST00000547517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
RAB5C-204ENST00000547517 A0A1B0GW15 77 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
RAB5C-204ENST00000547517 I3L3M4 83 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 PPP1R2P9O14990 202 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 HBBP68871 147 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 REG3AQ06141 175 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 LINC00518Q8N0U6 118 aa7.8□□□□□ -1.16
RAB5C-204ENST00000547517 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 A0A1B0GUV1 79 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 A0A1B0GXF2 115 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 COLCA2A8K830 154 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 TSHBP01222 138 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 MRPL51Q4U2R6 128 aaKnown RBP7.79□□□□□ -1.16
RAB5C-204ENST00000547517 FAM104BQ5XKR9 115 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 AMMECR1LQ6DCA0 310 aa7.79□□□□□ -1.16
RAB5C-204ENST00000547517 SMIM6P0DI80 62 aa7.78□□□□□ -1.16
RAB5C-204ENST00000547517 RAB5AP20339 215 aa7.78□□□□□ -1.16
RAB5C-204ENST00000547517 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
RAB5C-204ENST00000547517 NRACQ8N912 160 aa7.78□□□□□ -1.16
RAB5C-204ENST00000547517 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
RAB5C-204ENST00000547517 CTDSP1Q9GZU7 261 aa7.78□□□□□ -1.16
RAB5C-204ENST00000547517 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
RAB5C-204ENST00000547517 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
RAB5C-204ENST00000547517 PPP1R17O96001 155 aa7.77□□□□□ -1.17
RAB5C-204ENST00000547517 FGF6P10767 208 aa7.77□□□□□ -1.17
RAB5C-204ENST00000547517 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
RAB5C-204ENST00000547517 SUMO2P61956 95 aaKnown RBP7.77□□□□□ -1.17
RAB5C-204ENST00000547517 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
RAB5C-204ENST00000547517 D6R8Y8 96 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 USP17L23D6RBM5 183 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms