RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 IMUPQ9GZP8 106 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 JPT2Q9H910 190 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 PEMTQ9UBM1 199 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 GAGE2DQ9UEU5 116 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 CSDC2Q9Y534 153 aaKnown RBP4.73□□□□□ -1.65
SNHG1-225ENST00000545920 ICOSQ9Y6W8 199 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 AGRNO00468 2067 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 TRAV25A0A0B4J276 109 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 LST1O00453 97 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 CMC4P56277 68 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-225ENST00000545920 HERVK_113P63121 156 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 HERV-K104P63124 156 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 GAGE5Q13069 117 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 GAGE6Q13070 117 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 TMEM61Q8N0U2 210 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 UBE2D4Q9Y2X8 147 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 FREM2Q5SZK8 3169 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 VPS13AQ96RL7 3174 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 FRYLO94915 3013 aa4.72□□□□□ -1.65
SNHG1-225ENST00000545920 ABCA4P78363 2273 aa4.71□□□□□ -1.65
SNHG1-225ENST00000545920 PTPRZ1P23471 2315 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-225ENST00000545920 PTPRQQ9UMZ3 2332 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 IGKV3-7A0A075B6H7 116 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 IGHV3OR16-10A0A075B7F0 116 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 H7C423 109 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 RS1O15537 224 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 ATP5G1P05496 136 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 EMP1P54849 157 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 SPINK13Q1W4C9 94 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 SFTA2Q6UW10 78 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 C2orf82Q6UX34 121 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 Q8N2B8 174 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 VPREB3Q9UKI3 123 aa4.71□□□□□ -1.66
SNHG1-225ENST00000545920 TRAV26-1A0A087WT03 109 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 TRAV4A0A0B4J268 109 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 FSHBP01225 129 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 INSP01308 110 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 TRACP01848 142 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-225ENST00000545920 DEFB1P60022 68 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 TTC32Q5I0X7 151 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 FAM222AQ5U5X8 452 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-225ENST00000545920 DUX5Q96PT3 197 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 TTC28Q96AY4 2481 aa4.7□□□□□ -1.66
SNHG1-225ENST00000545920 ARHGAP32A7KAX9 2087 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 TRAV12-2A0A075B6T6 113 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 IGHV4-30-2A0A087WSY4 118 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 COX7A2LO14548 114 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE7O76087 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 PRSS2P07478 247 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE12FP0CL80 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE12GP0CL81 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE12IP0CL82 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 NDUFV3P56181 108 aaKnown RBP4.69□□□□□ -1.66
SNHG1-225ENST00000545920 SYNJ2BPP57105 145 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 GAGE4Q13068 117 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 DAZ2Q13117 558 aaKnown RBP4.69□□□□□ -1.66
SNHG1-225ENST00000545920 DAZ4Q86SG3 579 aaKnown RBP4.69□□□□□ -1.66
SNHG1-225ENST00000545920 TMEM86BQ8N661 226 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 DUX3Q96PT4 197 aa4.69□□□□□ -1.66
SNHG1-225ENST00000545920 DAZ3Q9NR90 486 aaKnown RBP4.69□□□□□ -1.66
SNHG1-225ENST00000545920 MUC4Q99102 2169 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 C19orf84I3L1E1 186 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 PRYO14603 147 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 INAFM2P0DMQ5 153 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 DEFB112Q30KQ8 113 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 Q6YL49 198 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 IL17DQ8TAD2 202 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 C4orf3Q8WVX3 66 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 FAM104AQ969W3 186 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 OPRPNQ99935 248 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-225ENST00000545920 ZNF702PQ9H963 129 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 GVINP1Q7Z2Y8 2422 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 BAHCC1Q9P281 2608 aa4.68□□□□□ -1.66
SNHG1-225ENST00000545920 FRYQ5TBA9 3013 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 TLN1Q9Y490 2541 aaKnown RBP4.67□□□□□ -1.66
SNHG1-225ENST00000545920 TRAV13-2A0A0B4J235 113 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 IGHV4-59P01825 116 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 GNLYP22749 145 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 DEFB131AP59861 70 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 RPL36AP83881 106 aaKnown RBP4.67□□□□□ -1.66
SNHG1-225ENST00000545920 DAND5Q8N907 189 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 C15orf53Q8NAA6 179 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 C11orf72Q8NBR9 251 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 LINC00308Q8TCZ7 52 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 RPL36ALQ969Q0 106 aaKnown RBP4.67□□□□□ -1.66
SNHG1-225ENST00000545920 TMEM101Q96IK0 257 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 FAM110AQ9BQ89 295 aa4.67□□□□□ -1.66
SNHG1-225ENST00000545920 ANKRD11Q6UB99 2663 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-225ENST00000545920 SPTA1P02549 2419 aa4.66□□□□□ -1.66
SNHG1-225ENST00000545920 RIF1Q5UIP0 2472 aaKnown RBP4.66□□□□□ -1.66
SNHG1-225ENST00000545920 A0A096LNT2 108 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms