RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 EIF4EBP3O60516 100 aaPredicted RBP13.89□□□□□ -0.19
MSLN-202ENST00000545450 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 EDN2P20800 178 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 RNF152Q8N8N0 203 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 SMR3AQ99954 134 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 TMEM263Q8WUH6 116 aaKnown RBP13.88□□□□□ -0.19
MSLN-202ENST00000545450 SLC25A20O43772 301 aa13.88□□□□□ -0.19
MSLN-202ENST00000545450 A0A0B4J2C4 111 aa13.87□□□□□ -0.19
MSLN-202ENST00000545450 NSUN5P1Q3KNT7 163 aa13.87□□□□□ -0.19
MSLN-202ENST00000545450 Q6ZSV7 163 aa13.87□□□□□ -0.19
MSLN-202ENST00000545450 DAZ1Q9NQZ3 744 aaKnown RBP13.87□□□□□ -0.19
MSLN-202ENST00000545450 ERG28Q9UKR5 140 aa13.87□□□□□ -0.19
MSLN-202ENST00000545450 RHOHQ15669 191 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 RAX2Q96IS3 184 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 M0QY20 66 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 P0DMU3 169 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 FAM231AP0DMU4 169 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 FAM231CP0DMU5 169 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 C9orf85Q96MD7 179 aa13.86□□□□□ -0.19
MSLN-202ENST00000545450 ZNF256Q9Y2P7 627 aaPredicted RBP13.86□□□□□ -0.19
MSLN-202ENST00000545450 TRAV12-3A0A0B4J271 114 aa13.85□□□□□ -0.19
MSLN-202ENST00000545450 OPRPNQ99935 248 aaPredicted RBP13.85□□□□□ -0.19
MSLN-202ENST00000545450 C9JAW5 83 aa13.85□□□□□ -0.19
MSLN-202ENST00000545450 SRD5A1P18405 259 aa13.85□□□□□ -0.19
MSLN-202ENST00000545450 IGHV3-16A0A0C4DH30 117 aa13.84□□□□□ -0.19
MSLN-202ENST00000545450 ID1P41134 155 aa13.84□□□□□ -0.19
MSLN-202ENST00000545450 FAM74A4Q5TZK3 123 aa13.84□□□□□ -0.19
MSLN-202ENST00000545450 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
MSLN-202ENST00000545450 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
MSLN-202ENST00000545450 A0A0J9YX75 114 aa13.83□□□□□ -0.19
MSLN-202ENST00000545450 K7EMT4 169 aa13.83□□□□□ -0.19
MSLN-202ENST00000545450 ZNF22P17026 224 aaPredicted RBP13.83□□□□□ -0.19
MSLN-202ENST00000545450 TRPT1Q86TN4 253 aaKnown RBP13.83□□□□□ -0.19
MSLN-202ENST00000545450 MUSTN1Q8IVN3 82 aa13.83□□□□□ -0.19
MSLN-202ENST00000545450 RHODO00212 210 aa13.83□□□□□ -0.2
MSLN-202ENST00000545450 RNF183Q96D59 192 aa13.83□□□□□ -0.2
MSLN-202ENST00000545450 MDFICQ9P1T7 246 aa13.83□□□□□ -0.2
MSLN-202ENST00000545450 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 TRAV2A0A0B4J234 112 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 C20orf203Q8NBC4 194 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 CITED1Q99966 193 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 SVIPQ8NHG7 77 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 LINC01600Q96MT4 127 aa13.82□□□□□ -0.2
MSLN-202ENST00000545450 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.81□□□□□ -0.2
MSLN-202ENST00000545450 M0R2P5 195 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 ZNF56Q15929 161 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 ZFAND6Q6FIF0 208 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 ODF3Q96PU9 254 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 SYNJ2BPP57105 145 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
MSLN-202ENST00000545450 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
MSLN-202ENST00000545450 LY6G6DO95868 133 aa13.79□□□□□ -0.2
MSLN-202ENST00000545450 IGLV4-3A0A075B6K6 122 aa13.79□□□□□ -0.2
MSLN-202ENST00000545450 A0A0J9YXV3 536 aa13.79□□□□□ -0.2
MSLN-202ENST00000545450 H7C2G1 150 aa13.79□□□□□ -0.2
MSLN-202ENST00000545450 ATXN8Q156A1 80 aa13.79□□□□□ -0.2
MSLN-202ENST00000545450 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 A0A0J9YXY3 114 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 I3L3M4 83 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 RNASE1P07998 156 aaKnown RBP13.78□□□□□ -0.2
MSLN-202ENST00000545450 Q8N1Y9 231 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 ANAPC13Q9BS18 74 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 LINC01620Q4KN68 170 aa13.78□□□□□ -0.2
MSLN-202ENST00000545450 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.2
MSLN-202ENST00000545450 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
MSLN-202ENST00000545450 SLURP1P55000 103 aa13.76□□□□□ -0.21
MSLN-202ENST00000545450 KHDC1LQ5JSQ8 128 aa13.76□□□□□ -0.21
MSLN-202ENST00000545450 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
MSLN-202ENST00000545450 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
MSLN-202ENST00000545450 LITAFQ99732 161 aa13.76□□□□□ -0.21
MSLN-202ENST00000545450 TRAV12-2A0A075B6T6 113 aa13.75□□□□□ -0.21
MSLN-202ENST00000545450 RPL13AP40429 203 aaKnown RBP13.75□□□□□ -0.21
MSLN-202ENST00000545450 DUX3Q96PT4 197 aa13.75□□□□□ -0.21
MSLN-202ENST00000545450 IGHV1OR15-1A0A075B7D0 117 aa13.75□□□□□ -0.21
MSLN-202ENST00000545450 HILS1P60008 231 aa13.75□□□□□ -0.21
MSLN-202ENST00000545450 Q1RN00 199 aa13.75□□□□□ -0.21
MSLN-202ENST00000545450 IGHV3-30-3P0DP02 117 aa13.74□□□□□ -0.21
MSLN-202ENST00000545450 TRBV10-2A0A0K0K1G8 114 aa13.73□□□□□ -0.21
MSLN-202ENST00000545450 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
MSLN-202ENST00000545450 HIVEP1P15822 2718 aa13.73□□□□□ -0.21
MSLN-202ENST00000545450 TRIAP1O43715 76 aa13.73□□□□□ -0.21
MSLN-202ENST00000545450 FAM104AQ969W3 186 aa13.73□□□□□ -0.21
MSLN-202ENST00000545450 NSD1Q96L73 2696 aaPredicted RBP13.73□□□□□ -0.21
MSLN-202ENST00000545450 IGKV3-20P01619 116 aa13.72□□□□□ -0.21
MSLN-202ENST00000545450 NHLRC4P0CG21 123 aaPredicted RBP13.72□□□□□ -0.21
MSLN-202ENST00000545450 MRPS36P82909 103 aaKnown RBP13.72□□□□□ -0.21
MSLN-202ENST00000545450 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
MSLN-202ENST00000545450 LINC01006Q8NI28 216 aa13.72□□□□□ -0.21
MSLN-202ENST00000545450 SPXQ9BT56 116 aa13.72□□□□□ -0.21
MSLN-202ENST00000545450 SETXQ7Z333 2677 aaKnown RBP13.72□□□□□ -0.21
MSLN-202ENST00000545450 C16orf95Q9H693 158 aa13.72□□□□□ -0.21
MSLN-202ENST00000545450 SNCGO76070 127 aa13.71□□□□□ -0.21
MSLN-202ENST00000545450 GAGE2BQ13066 116 aa13.71□□□□□ -0.21
MSLN-202ENST00000545450 GAGE2EQ4V326 116 aa13.71□□□□□ -0.21
MSLN-202ENST00000545450 TIMM21Q9BVV7 248 aa13.71□□□□□ -0.21
MSLN-202ENST00000545450 GAGE2DQ9UEU5 116 aa13.71□□□□□ -0.21
MSLN-202ENST00000545450 TRAV4A0A0B4J268 109 aa13.71□□□□□ -0.22
MSLN-202ENST00000545450 CD28P10747 220 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms