RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LINC01006Q8NI28 216 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 ZNF503Q96F45 646 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 CENPFP49454 3210 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 POLQO75417 2590 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 TRBV7-3A0A075B6L6 115 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 A0A087WZ39 114 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 K7ERJ3 54 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 COX7A2LO14548 114 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 C2orf82Q6UX34 121 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 SCRT2Q9NQ03 307 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 ARHGAP21Q5T5U3 1957 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 EBI3Q14213 229 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 DEFB114Q30KQ6 69 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 FAM167A-AS1Q96KT0 104 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 Q9UF83 564 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 ALPK3Q96L96 1907 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 MUC22E2RYF6 1773 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 PROP1O75360 226 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 KRTAP10-9P60411 292 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 SLC25A29Q8N8R3 303 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 MTORP42345 2549 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 J3QQQ9 107 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 PLXNB1O43157 2135 aa5.24□□□□□ -1.57
SRGAP1-206ENST00000543397 MPV17L2Q567V2 206 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 LGALS9BQ3B8N2 356 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 LGALS9CQ6DKI2 356 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 Q6Q795 121 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 VSIG2Q96IQ7 327 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 KLK12Q9UKR0 248 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 PSMG3-AS1Q96PY0 264 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 PTPRSQ13332 1948 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 LOC107984640A0A0U1RRK4 108 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 MBD6Q96DN6 1003 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 MSRB1Q9NZV6 116 aa5.23□□□□□ -1.57
SRGAP1-206ENST00000543397 K7EQG2 157 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 Q9H8V8 135 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 TRAV13-2A0A0B4J235 113 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 LY6LH3BQJ8 138 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 MED14OSP0DP75 135 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 C10orf99Q6UWK7 81 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 SMR3AQ99954 134 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 DEFB131BA0A096LNP1 70 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 LINC00482Q8N8I6 264 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 ZNF702PQ9H963 129 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 ARHGAP32A7KAX9 2087 aa5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 FLNBO75369 2602 aaKnown RBP5.22□□□□□ -1.57
SRGAP1-206ENST00000543397 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.57
SRGAP1-206ENST00000543397 K7ERS5 55 aa5.21□□□□□ -1.57
SRGAP1-206ENST00000543397 MDFICQ9P1T7 246 aa5.21□□□□□ -1.57
SRGAP1-206ENST00000543397 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 NDUFA1O15239 70 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 ZFP2Q6ZN57 461 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 C15orf53Q8NAA6 179 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 F8W1H4 67 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 K7EP34 96 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 HIST1H4AP62805 103 aaKnown RBP5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 ETDBQ3ZM63 59 aa5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 NTN5Q8WTR8 489 aaPredicted RBP5.21□□□□□ -1.58
SRGAP1-206ENST00000543397 IGKV1D-37A0A075B6S9 117 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 UQCRQO14949 82 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 MIFP14174 115 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 LINC00336Q6ZUF6 198 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 PKD1L2Q7Z442 2459 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 P0C879 139 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 PSMB8P28062 276 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 Q6ZTI0 123 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 DAND5Q8N907 189 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 PPDPFLQ8WWR9 84 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 BRI3O95415 125 aa5.2□□□□□ -1.58
SRGAP1-206ENST00000543397 C14orf177Q52M58 125 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 ODF3Q96PU9 254 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 NUP210LQ5VU65 1888 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 SOCS3O14543 225 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 BRWD1-AS2P59051 145 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 SPAG11BQ08648 103 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 BBC3Q96PG8 261 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 C1orf229Q6ZS94 237 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 DKK2Q9UBU2 259 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 LRP4O75096 1905 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 BEAN1Q3B7T3 259 aa5.19□□□□□ -1.58
SRGAP1-206ENST00000543397 AVPP01185 164 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 UBE2AP49459 152 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 Q6ZPA2 131 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 C9orf85Q96MD7 179 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 ZNF747Q9BV97 191 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 A0A1B0GX51 115 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 CTRLP40313 264 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 COA6Q5JTJ3 125 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 COL5A1P20908 1838 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms