RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
TMEM50B-210ENST00000542230 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
TMEM50B-210ENST00000542230 PRIMA1Q86XR5 153 aa12.3□□□□□ -0.44
TMEM50B-210ENST00000542230 FAM104AQ969W3 186 aa12.3□□□□□ -0.44
TMEM50B-210ENST00000542230 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
TMEM50B-210ENST00000542230 RHOHQ15669 191 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 BOD1L2Q8IYS8 172 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 CST9LQ9H4G1 147 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 OXLD1Q5BKU9 147 aa12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 RNASE13Q5GAN3 156 aaKnown RBP12.29□□□□□ -0.44
TMEM50B-210ENST00000542230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 IGKV2-29A2NJV5 120 aaPredicted RBP12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 X6R8D5 127 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 TRAV4A0A0B4J268 109 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 DEFB4AO15263 64 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 TIMM17AQ99595 171 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 CHCHD7Q9BUK0 85 aa12.28□□□□□ -0.44
TMEM50B-210ENST00000542230 C11orf86A6NJI1 115 aa12.27□□□□□ -0.44
TMEM50B-210ENST00000542230 PLNP26678 52 aa12.27□□□□□ -0.44
TMEM50B-210ENST00000542230 Q6ZVH6 145 aa12.27□□□□□ -0.44
TMEM50B-210ENST00000542230 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.44
TMEM50B-210ENST00000542230 OVOL2Q9BRP0 275 aa12.27□□□□□ -0.45
TMEM50B-210ENST00000542230 NBEAL1Q6ZS30 2694 aa12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 DEFB130BP0DP73 79 aa12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 DEFB130AP0DP74 79 aa12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 PMVKQ15126 192 aa12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 LBHQ53QV2 105 aaPredicted RBP12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 TMEM141Q96I45 108 aa12.26□□□□□ -0.45
TMEM50B-210ENST00000542230 IGLV4-3A0A075B6K6 122 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 K7EQD1 137 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 GAGE1Q13065 139 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 GAGE4Q13068 117 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 GAGE5Q13069 117 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 G0S2P27469 103 aa12.25□□□□□ -0.45
TMEM50B-210ENST00000542230 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
TMEM50B-210ENST00000542230 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
TMEM50B-210ENST00000542230 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
TMEM50B-210ENST00000542230 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 NTM-AS1Q6ZSK4 140 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 COTL1Q14019 142 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 C3orf56Q8N813 242 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 TENM3Q9P273 2699 aa12.22□□□□□ -0.45
TMEM50B-210ENST00000542230 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
TMEM50B-210ENST00000542230 FHL2Q14192 279 aa12.21□□□□□ -0.45
TMEM50B-210ENST00000542230 LINC00694P0DN24 101 aa12.21□□□□□ -0.46
TMEM50B-210ENST00000542230 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.46
TMEM50B-210ENST00000542230 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 DNAH3Q8TD57 4116 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 WIPF1O43516 503 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 UBE2D3P61077 147 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 UBE2D2P62837 147 aa12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
TMEM50B-210ENST00000542230 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 LINC01549A6NIU2 74 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 DLEU1O43261 78 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 VCX2Q9H322 139 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 TMEM170BQ5T4T1 132 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 Q6ZUT4 128 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
TMEM50B-210ENST00000542230 ZNF25P17030 456 aaPredicted RBP12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 K7EP13 123 aa12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 PYGO1Q9Y3Y4 419 aa12.18□□□□□ -0.46
TMEM50B-210ENST00000542230 TSPEAR-AS2P59090 65 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 AMELXQ99217 191 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 MGAM2Q2M2H8 2515 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 IGHV3-64A0A075B6Q5 118 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 KIR2DL5BQ8NHK3 375 aa12.16□□□□□ -0.46
TMEM50B-210ENST00000542230 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 E9PLD3 99 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 APOC4P55056 127 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
TMEM50B-210ENST00000542230 ZNF22P17026 224 aaPredicted RBP12.14□□□□□ -0.47
TMEM50B-210ENST00000542230 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
TMEM50B-210ENST00000542230 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
TMEM50B-210ENST00000542230 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
TMEM50B-210ENST00000542230 SIVA1O15304 175 aa12.13□□□□□ -0.47
TMEM50B-210ENST00000542230 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
TMEM50B-210ENST00000542230 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
TMEM50B-210ENST00000542230 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
TMEM50B-210ENST00000542230 Q8NAQ8 132 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms