RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TRAV14DV4A0A0A6YYC5 116 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 A0A0J9YW62 118 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 LOC107984640A0A0U1RRK4 108 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 FAM236DA0A1B0GTK5 79 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 A0A1W2PPM0 123 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 IRGMA1A4Y4 181 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 OR4C45A6NMZ5 311 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 RIIAD1A6NNX1 92 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 M0R381 172 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 OVOL1O14753 267 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 PSCAO43653 123 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 PITX3O75364 302 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 NDUFB6O95139 128 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 MT-ATP8P03928 68 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 FAM236CP0DP71 79 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 FAUP35544 74 aaKnown RBP2.4□□□□□ -2.03
SNHG1-217ENST00000541578 ASIPP42127 132 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 ATP5G3P48201 142 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 TMEM258P61165 79 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 SLC38A11Q08AI6 406 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 DEFB121Q5J5C9 76 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 IBA57Q5T440 356 aaKnown RBP2.4□□□□□ -2.03
SNHG1-217ENST00000541578 NOXRED1Q6NXP6 359 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 HRCT1Q6UXD1 115 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 SIGLECL1Q8N7X8 197 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 CLDND2Q8NHS1 167 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 SMIM4Q8WVI0 70 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 AQP10Q96PS8 301 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 HIGD2AQ9BW72 106 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 LSM2Q9Y333 95 aaKnown RBP2.4□□□□□ -2.03
SNHG1-217ENST00000541578 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 DNAJC15Q9Y5T4 150 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 PXMP4Q9Y6I8 212 aa2.4□□□□□ -2.03
SNHG1-217ENST00000541578 MUC21A0A0G2JKD1 596 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 MUC21A0A140T8X8 626 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 A0A1W2PQD3 144 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 H3BMG7 143 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 UQCRQO14949 82 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 LECT2O14960 151 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 LY6HO94772 140 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 NAPSAO96009 420 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 MT-ND6P03923 174 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 CLPSP04118 112 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 LPAR6P43657 344 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 LINC00313P59037 77 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 FOXF1Q12946 379 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 DIAPH2-AS1Q14236 149 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 MSMO1Q15800 293 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 PRR9Q5T870 116 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 Q5XG85 94 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 SLC48A1Q6P1K1 146 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 ZNF322Q6U7Q0 402 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-217ENST00000541578 IGFL1Q6UW32 110 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 SCXQ7RTU7 201 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 ATOH7Q8N100 152 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 NUP35Q8NFH5 326 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 OR4X2Q8NGF9 303 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 LINC00526Q96FQ7 95 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 NAA38Q9BRA0 125 aaKnown RBP2.39□□□□□ -2.03
SNHG1-217ENST00000541578 AICDAQ9GZX7 198 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 PCTPQ9UKL6 214 aa2.39□□□□□ -2.03
SNHG1-217ENST00000541578 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
SNHG1-217ENST00000541578 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 IGKV2-24A0A0C4DH68 120 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 GRIFINA4D1Z8 144 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 ZNF727A8MUV8 499 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 FXYD1O00168 92 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 SNCGO76070 127 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 SLC25A5P05141 298 aaKnown RBP2.38□□□□□ -2.03
SNHG1-217ENST00000541578 IFI6P09912 130 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 INAFM2P0DMQ5 153 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 P0DMU3 169 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 BCL2P10415 239 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 COL8A2P25067 703 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 PSMB8P28062 276 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 ZNF90Q03938 601 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 NNATQ16517 81 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 RRN3P1Q2M238 152 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 MPV17LQ2QL34 196 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 MRPL51Q4U2R6 128 aaKnown RBP2.38□□□□□ -2.03
SNHG1-217ENST00000541578 C9orf153Q5TBE3 101 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 LYRM7Q5U5X0 104 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 ZFAND2AQ8N6M9 145 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 OR4K13Q8NH42 304 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 OTOSQ8NHW6 89 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 COMMD5Q9GZQ3 224 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 ABRACLQ9P1F3 81 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
SNHG1-217ENST00000541578 TRAV26-2A0A0B4J265 109 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 C3orf85A0A1B0GTC6 90 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms