RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ELANEP08246 267 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 ZNF843Q8N446 348 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 PRORYQ9H606 182 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 TRAV8-2A0A0B4J237 113 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 IGHG4P01861 327 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 HOXD3P31249 432 aaPredicted RBP3.98□□□□□ -1.77
PROM1-220ENST00000540805 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 TEN1Q86WV5 123 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 PLEKHB2Q96CS7 222 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 PSMG3-AS1Q96PY0 264 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 SMIM2Q9BVW6 85 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 JPT2Q9H910 190 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
PROM1-220ENST00000540805 SMAD5-AS1Q9Y6J3 95 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 IGLV11-55A0A075B6I3 123 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 TRAV2A0A0B4J234 112 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 PAX4O43316 350 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
PROM1-220ENST00000540805 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 FBXL19-AS1Q494R0 122 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 C10orf105Q8TEF2 133 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 FANCD2OSQ96PS1 177 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 NBEAL1Q6ZS30 2694 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 A8MWV9 139 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 UBE2D1P51668 147 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 CEMP1Q6PRD7 247 aaPredicted RBP3.97□□□□□ -1.77
PROM1-220ENST00000540805 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 RBAKDNA6NC62 111 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 F8W735 103 aaPredicted RBP3.97□□□□□ -1.77
PROM1-220ENST00000540805 J3QLI3 93 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 RHODO00212 210 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 DEFB1P60022 68 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 UBE2D3P61077 147 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 UBE2D2P62837 147 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 NEXN-AS1Q8NBZ9 246 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 TOMM6Q96B49 74 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 ZNRF2Q8NHG8 242 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 CITED2Q99967 270 aaPredicted RBP3.97□□□□□ -1.77
PROM1-220ENST00000540805 C11orf21Q9P2W6 132 aa3.97□□□□□ -1.77
PROM1-220ENST00000540805 IGHV7-4-1A0A0J9YVY3 117 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 A0A1W2PPR1 153 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 LY6LH3BQJ8 138 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 NXPH4O95158 308 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 IFITM1P13164 125 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 S100A7L2Q5SY68 101 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 BAALCQ8WXS3 180 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 RASL10AQ92737 203 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 EDA2RQ9HAV5 297 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 NPBQ8NG41 125 aa3.96□□□□□ -1.78
PROM1-220ENST00000540805 IGHV4-4A0A075B6R2 117 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 CTSGP08311 255 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 PFN2P35080 140 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 NDUFA11Q86Y39 141 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 AGPAT4-IT1Q9H0P7 198 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 NOP10Q9NPE3 64 aaKnown RBP3.95□□□□□ -1.78
PROM1-220ENST00000540805 C9JAW5 83 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
PROM1-220ENST00000540805 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 NTN5Q8WTR8 489 aaPredicted RBP3.95□□□□□ -1.78
PROM1-220ENST00000540805 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 RS1O15537 224 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 ANGP03950 147 aaKnown RBP3.95□□□□□ -1.78
PROM1-220ENST00000540805 DEFB135Q30KP9 77 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 Q6ZS46 218 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 TMEM86BQ8N661 226 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 C15orf53Q8NAA6 179 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
PROM1-220ENST00000540805 PRB2P02812 416 aaPredicted RBP3.94□□□□□ -1.78
PROM1-220ENST00000540805 C11orf71Q6IPW1 123 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 SLC25A20O43772 301 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 APOC4P55056 127 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
PROM1-220ENST00000540805 PRIMA1Q86XR5 153 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 IGHV7-81A0A0B4J1V7 117 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 H3BMM0 161 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 VCYO14598 125 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 Q6ZSV7 163 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 UBE2WQ96B02 151 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 RPL39LQ96EH5 51 aaKnown RBP3.94□□□□□ -1.78
PROM1-220ENST00000540805 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
PROM1-220ENST00000540805 SMR3AQ99954 134 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 TEX15Q9BXT5 2789 aa3.94□□□□□ -1.78
PROM1-220ENST00000540805 IGHV1OR15-1A0A075B7D0 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 ZNF561-AS1K7EIQ3 104 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 NDUFA4O00483 81 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 BUB3O43684 328 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 CFC1P0CG37 223 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
PROM1-220ENST00000540805 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms