RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-215ENST00000540783 IGHV3-30-5P0DP03 117 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 ASIPP42127 132 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 RNF152Q8N8N0 203 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 NTN5Q8WTR8 489 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 ATRQ13535 2644 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 EIF4EBP3O60516 100 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 C9orf47Q6ZRZ4 202 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 MRAPQ8TCY5 172 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 COL12A1Q99715 3063 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRBV12-3P01733 135 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 HERVK_113P61574 105 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 ZFAND2AQ8N6M9 145 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 CITED1Q99966 193 aa4.21□□□□□ -1.74
RAPGEF4-215ENST00000540783 CCDC179H3BU77 68 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 NHLRC4P0CG21 123 aaPredicted RBP4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE5Q13069 117 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE6Q13070 117 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 UNQ9165/PRO28630Q6UXU0 137 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 TEX49A0A1B0GTD5 131 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 DEFB131AP59861 70 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE2BQ13066 116 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE2EQ4V326 116 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 LYRM7Q5U5X0 104 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE2DQ9UEU5 116 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 CELSR1Q9NYQ6 3014 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 TENM4Q6N022 2769 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRAV21A0A0B4J279 112 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 J3QQQ9 107 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 NPC2P61916 151 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 PMVKQ15126 192 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 SLC25A29Q8N8R3 303 aa4.2□□□□□ -1.74
RAPGEF4-215ENST00000540783 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 SNCGO76070 127 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 PRSS2P07478 247 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 Q8N1Y9 231 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 SUMO4Q6EEV6 95 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 LINC00477Q96M19 166 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 MUC4Q99102 2169 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 SDHAF1A6NFY7 115 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 INSP01308 110 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 IGHV3-33P01772 117 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 TTC32Q5I0X7 151 aa4.19□□□□□ -1.74
RAPGEF4-215ENST00000540783 SBSPONQ8IVN8 264 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 LINC00482Q8N8I6 264 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 AMELXQ99217 191 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 TMEM262E9PQX1 116 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 EDN2P20800 178 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 NDUFV3P56181 108 aaKnown RBP4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 LINC00315P59091 139 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 MRPL53Q96EL3 112 aaKnown RBP4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 LINC01587Q99440 93 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 COL6A5A8TX70 2615 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 IGHV3OR16-12A0A075B7B8 117 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 A0A0J9YXV3 536 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 RPL35AP18077 110 aaKnown RBP4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 CFHR3Q02985 330 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 RNASE13Q5GAN3 156 aaKnown RBP4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 FAM159AQ6UWV7 190 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 SMIM20Q8N5G0 67 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 VCX2Q9H322 139 aa4.18□□□□□ -1.74
RAPGEF4-215ENST00000540783 NOTCH1P46531 2555 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 HRNRQ86YZ3 2850 aaPredicted RBP4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRAV12-3A0A0B4J271 114 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 TMEM263Q8WUH6 116 aaKnown RBP4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 SPXQ9BT56 116 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 NOTCH3Q9UM47 2321 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRGV11A0A075B6L2 103 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 RHODO00212 210 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 VCYO14598 125 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 LINC01620Q4KN68 170 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 C10orf99Q6UWK7 81 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRAV12-2A0A075B6T6 113 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 TRAV8-4A0A0B4J246 113 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 A8MZ25 164 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE7O76087 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 GAGE4Q13068 117 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 ZNF56Q15929 161 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 KIF25-AS1Q9Y6Z4 181 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 U3KQE9 123 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 CUBNO60494 3623 aa4.17□□□□□ -1.74
RAPGEF4-215ENST00000540783 IFITM1P13164 125 aa4.16□□□□□ -1.74
RAPGEF4-215ENST00000540783 HERV-K104P63124 156 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms