RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 G3V3Q6 166 aa12.44□□□□□ -0.42
LPCAT3-210ENST00000540090 CACNG7P62955 275 aa12.44□□□□□ -0.42
LPCAT3-210ENST00000540090 HIGD2BQ4VC39 106 aa12.44□□□□□ -0.42
LPCAT3-210ENST00000540090 REG3GQ6UW15 175 aa12.44□□□□□ -0.42
LPCAT3-210ENST00000540090 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
LPCAT3-210ENST00000540090 RPL35P42766 123 aaKnown RBP12.43□□□□□ -0.42
LPCAT3-210ENST00000540090 SRSF9Q13242 221 aaKnown RBP eCLIP12.43□□□□□ -0.42
LPCAT3-210ENST00000540090 COTL1Q14019 142 aa12.43□□□□□ -0.42
LPCAT3-210ENST00000540090 A0A1B0GV50 99 aa12.42□□□□□ -0.42
LPCAT3-210ENST00000540090 ARPC5O15511 151 aa12.42□□□□□ -0.42
LPCAT3-210ENST00000540090 AMTP48728 403 aa12.42□□□□□ -0.42
LPCAT3-210ENST00000540090 RPS20P60866 119 aaKnown RBP12.42□□□□□ -0.42
LPCAT3-210ENST00000540090 A0A096LNI7 61 aa12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 IGKV3OR2-268A0A0C4DH90 116 aa12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 OR2D3Q8NGH3 330 aa12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
LPCAT3-210ENST00000540090 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
LPCAT3-210ENST00000540090 F2Z2F3 143 aa12.4□□□□□ -0.42
LPCAT3-210ENST00000540090 KCNRGQ8N5I3 272 aa12.4□□□□□ -0.42
LPCAT3-210ENST00000540090 LINC00474Q9P2X8 69 aa12.4□□□□□ -0.42
LPCAT3-210ENST00000540090 LPAP08519 4548 aa12.39□□□□□ -0.43
LPCAT3-210ENST00000540090 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
LPCAT3-210ENST00000540090 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
LPCAT3-210ENST00000540090 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
LPCAT3-210ENST00000540090 NTF3P20783 257 aa12.37□□□□□ -0.43
LPCAT3-210ENST00000540090 Q6ZRP5 223 aa12.37□□□□□ -0.43
LPCAT3-210ENST00000540090 C11orf52Q96A22 123 aa12.37□□□□□ -0.43
LPCAT3-210ENST00000540090 H2AFB1P0C5Y9 115 aa12.36□□□□□ -0.43
LPCAT3-210ENST00000540090 FOXI1Q12951 378 aa12.36□□□□□ -0.43
LPCAT3-210ENST00000540090 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
LPCAT3-210ENST00000540090 LYZL1Q6UWQ5 148 aa12.36□□□□□ -0.43
LPCAT3-210ENST00000540090 XKRY2A2RUG3 117 aa12.35□□□□□ -0.43
LPCAT3-210ENST00000540090 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
LPCAT3-210ENST00000540090 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
LPCAT3-210ENST00000540090 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
LPCAT3-210ENST00000540090 H7C423 109 aa12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 IFNA1P01562 189 aa12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 Q6ZNX1 250 aa12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 GATD1Q8NB37 220 aa12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
LPCAT3-210ENST00000540090 NCR2O95944 276 aa12.32□□□□□ -0.44
LPCAT3-210ENST00000540090 CCL20P78556 96 aa12.32□□□□□ -0.44
LPCAT3-210ENST00000540090 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
LPCAT3-210ENST00000540090 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.31□□□□□ -0.44
LPCAT3-210ENST00000540090 IGKV2-29A2NJV5 120 aaPredicted RBP12.31□□□□□ -0.44
LPCAT3-210ENST00000540090 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
LPCAT3-210ENST00000540090 FGF6P10767 208 aa12.31□□□□□ -0.44
LPCAT3-210ENST00000540090 ZNF345Q14585 488 aa12.31□□□□□ -0.44
LPCAT3-210ENST00000540090 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 CTRLP40313 264 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 GNG4P50150 75 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 LINC00526Q96FQ7 95 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 GNG13Q9P2W3 67 aa12.3□□□□□ -0.44
LPCAT3-210ENST00000540090 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
LPCAT3-210ENST00000540090 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
LPCAT3-210ENST00000540090 XCL1P47992 114 aa12.29□□□□□ -0.44
LPCAT3-210ENST00000540090 TWIST1Q15672 202 aa12.29□□□□□ -0.44
LPCAT3-210ENST00000540090 APCSP02743 223 aa12.28□□□□□ -0.44
LPCAT3-210ENST00000540090 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
LPCAT3-210ENST00000540090 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.45
LPCAT3-210ENST00000540090 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.45
LPCAT3-210ENST00000540090 ZNF25P17030 456 aaPredicted RBP12.27□□□□□ -0.45
LPCAT3-210ENST00000540090 BIN3Q9NQY0 253 aa12.27□□□□□ -0.45
LPCAT3-210ENST00000540090 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 CCL25O15444 150 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 PTTG1IPP53801 180 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 NUDT11Q96G61 164 aa12.26□□□□□ -0.45
LPCAT3-210ENST00000540090 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
LPCAT3-210ENST00000540090 SDHAF1A6NFY7 115 aa12.24□□□□□ -0.45
LPCAT3-210ENST00000540090 HMSDA8MTL9 139 aa12.24□□□□□ -0.45
LPCAT3-210ENST00000540090 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
LPCAT3-210ENST00000540090 BCL2L11O43521 198 aa12.24□□□□□ -0.45
LPCAT3-210ENST00000540090 BTF3L4Q96K17 158 aa12.24□□□□□ -0.45
LPCAT3-210ENST00000540090 A0A1W2PNN7 141 aa12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 EIF5AP63241 154 aaKnown RBP12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 TEX261Q6UWH6 196 aa12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 TMEM101Q96IK0 257 aa12.23□□□□□ -0.45
LPCAT3-210ENST00000540090 PDE6DO43924 150 aa12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 ESDP10768 282 aa12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 MEF2BQ02080 365 aaPredicted RBP12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 GAGE2BQ13066 116 aa12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 MED9Q9NWA0 146 aa12.22□□□□□ -0.45
LPCAT3-210ENST00000540090 LOC107984640A0A0U1RRK4 108 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 I3L3M4 83 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 PMCHP20382 165 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 SS18Q15532 418 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 PSORS1C2Q9UIG4 136 aa12.21□□□□□ -0.45
LPCAT3-210ENST00000540090 CAMPP49913 170 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms