RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
SCNN1A-215ENST00000540037 C15orf53Q8NAA6 179 aa10.21□□□□□ -0.77
SCNN1A-215ENST00000540037 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.77
SCNN1A-215ENST00000540037 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.78
SCNN1A-215ENST00000540037 C2orf82Q6UX34 121 aa10.21□□□□□ -0.78
SCNN1A-215ENST00000540037 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.78
SCNN1A-215ENST00000540037 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 H3BMM0 161 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 UBE2WQ96B02 151 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 M0QXV9 152 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 BRI3O95415 125 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 Q6ZSN1 163 aa10.2□□□□□ -0.78
SCNN1A-215ENST00000540037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.19□□□□□ -0.78
SCNN1A-215ENST00000540037 IGKV2-29A2NJV5 120 aaPredicted RBP10.19□□□□□ -0.78
SCNN1A-215ENST00000540037 H3BUA1 57 aa10.19□□□□□ -0.78
SCNN1A-215ENST00000540037 AVPP01185 164 aa10.19□□□□□ -0.78
SCNN1A-215ENST00000540037 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
SCNN1A-215ENST00000540037 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
SCNN1A-215ENST00000540037 CFHR3Q02985 330 aa10.18□□□□□ -0.78
SCNN1A-215ENST00000540037 IFITM1P13164 125 aa10.18□□□□□ -0.78
SCNN1A-215ENST00000540037 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
SCNN1A-215ENST00000540037 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
SCNN1A-215ENST00000540037 IGHV1-58A0A0C4DH39 117 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 K7EMT4 169 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 NBL1P41271 181 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 LY6DQ14210 128 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 K7EQG2 157 aa10.17□□□□□ -0.78
SCNN1A-215ENST00000540037 VSIG2Q96IQ7 327 aa10.16□□□□□ -0.78
SCNN1A-215ENST00000540037 MXRA5Q9NR99 2828 aa10.16□□□□□ -0.78
SCNN1A-215ENST00000540037 MIAQ16674 131 aa10.16□□□□□ -0.78
SCNN1A-215ENST00000540037 PSMB8P28062 276 aa10.15□□□□□ -0.78
SCNN1A-215ENST00000540037 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
SCNN1A-215ENST00000540037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.15□□□□□ -0.78
SCNN1A-215ENST00000540037 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE12JA6NER3 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE7O76087 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE12FP0CL80 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE12GP0CL81 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE12IP0CL82 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 GAGE4Q13068 117 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 C3orf56Q8N813 242 aa10.15□□□□□ -0.79
SCNN1A-215ENST00000540037 IGHV4-30-2A0A087WSY4 118 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 TMEM61Q8N0U2 210 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 TNFRSF18Q9Y5U5 241 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 IGHV4-59P01825 116 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 LINC00467Q9BRT7 94 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 PYGO1Q9Y3Y4 419 aa10.14□□□□□ -0.79
SCNN1A-215ENST00000540037 FLNCQ14315 2725 aa10.13□□□□□ -0.79
SCNN1A-215ENST00000540037 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
SCNN1A-215ENST00000540037 C2CD3Q4AC94 2353 aa10.13□□□□□ -0.79
SCNN1A-215ENST00000540037 LST1O00453 97 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 COX6CP09669 75 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 AKAP9Q99996 3911 aa10.12□□□□□ -0.79
SCNN1A-215ENST00000540037 TINCRA0A1B0GVN0 87 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 COX6A2Q02221 97 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 PIMREGQ9BSJ6 248 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 CENPEQ02224 2701 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 POLQO75417 2590 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 TRGV11A0A075B6L2 103 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 NDUFA7O95182 113 aa10.11□□□□□ -0.79
SCNN1A-215ENST00000540037 RBMY1BA6NDE4 496 aaKnown RBP10.1□□□□□ -0.79
SCNN1A-215ENST00000540037 RBMY1EA6NEQ0 496 aaKnown RBP10.1□□□□□ -0.79
SCNN1A-215ENST00000540037 RBMY1DP0C7P1 496 aaKnown RBP10.1□□□□□ -0.79
SCNN1A-215ENST00000540037 C10orf105Q8TEF2 133 aa10.1□□□□□ -0.79
SCNN1A-215ENST00000540037 H3BT86 120 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 DEFB131AP59861 70 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 Q6Q795 121 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 Q8N2B8 174 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 MSMBP08118 114 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 C18orf65Q6ZTR6 163 aa10.09□□□□□ -0.79
SCNN1A-215ENST00000540037 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
SCNN1A-215ENST00000540037 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
SCNN1A-215ENST00000540037 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
SCNN1A-215ENST00000540037 CFAP46Q8IYW2 2715 aa10.08□□□□□ -0.8
SCNN1A-215ENST00000540037 GNLYP22749 145 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 CCL19Q99731 98 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 ATP5J2P56134 94 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 NRGNQ92686 78 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 Q9H8V8 135 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 FBN2P35556 2912 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 MAPK1IP1LQ8NDC0 245 aa10.07□□□□□ -0.8
SCNN1A-215ENST00000540037 MEIG1Q5JSS6 88 aa10.06□□□□□ -0.8
SCNN1A-215ENST00000540037 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
SCNN1A-215ENST00000540037 MYO9AB2RTY4 2548 aa10.06□□□□□ -0.8
SCNN1A-215ENST00000540037 SPANXA1Q9NS26 97 aa10.06□□□□□ -0.8
SCNN1A-215ENST00000540037 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
SCNN1A-215ENST00000540037 SLURP1P55000 103 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms