RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PGPEP1Q9NXJ5 209 aa12.5□□□□□ -0.41
PCDHB17P-201ENST00000539533 MGPP08493 103 aa12.5□□□□□ -0.41
PCDHB17P-201ENST00000539533 SMCPP49901 116 aaPredicted RBP12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 CFAP126Q5VTH2 177 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 PRSS29PA6NIE9 313 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 Q8N1Y9 231 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
PCDHB17P-201ENST00000539533 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
PCDHB17P-201ENST00000539533 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
PCDHB17P-201ENST00000539533 MUC4Q99102 2169 aa12.48□□□□□ -0.41
PCDHB17P-201ENST00000539533 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
PCDHB17P-201ENST00000539533 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 BEAN1Q3B7T3 259 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 STHQ8IWL8 128 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 WFDC10AQ9H1F0 79 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 SFTA2Q6UW10 78 aa12.47□□□□□ -0.41
PCDHB17P-201ENST00000539533 TRRAPQ9Y4A5 3859 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 PRM2P04554 102 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 HTN1P15515 57 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 PSMB2P49721 201 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.41
PCDHB17P-201ENST00000539533 FBN1P35555 2871 aaKnown RBP12.46□□□□□ -0.42
PCDHB17P-201ENST00000539533 Q6ZUT4 128 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 C19orf73Q9NVV2 129 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 LOC107984156A0A0G2JMH3 177 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 LINC01549A6NIU2 74 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 PPP1R17O96001 155 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 XGP55808 180 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 ARL17AQ8IVW1 177 aa12.45□□□□□ -0.42
PCDHB17P-201ENST00000539533 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 PTH2Q96A98 100 aa12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 XCL2Q9UBD3 114 aa12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 A6NJY4 79 aa12.44□□□□□ -0.42
PCDHB17P-201ENST00000539533 CRYGDP07320 174 aa12.43□□□□□ -0.42
PCDHB17P-201ENST00000539533 ZFP2Q6ZN57 461 aa12.43□□□□□ -0.42
PCDHB17P-201ENST00000539533 POM121L12Q8N7R1 296 aa12.43□□□□□ -0.42
PCDHB17P-201ENST00000539533 C9orf85Q96MD7 179 aa12.43□□□□□ -0.42
PCDHB17P-201ENST00000539533 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 RNF183Q96D59 192 aa12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 NXPH4O95158 308 aa12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 TSPAN13O95857 204 aa12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 UBE2D1P51668 147 aa12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 SRSF9Q13242 221 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 JPT2Q9H910 190 aa12.42□□□□□ -0.42
PCDHB17P-201ENST00000539533 TSHBP01222 138 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 LINC00315P59091 139 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 LINC01587Q99440 93 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
PCDHB17P-201ENST00000539533 INSP01308 110 aa12.4□□□□□ -0.42
PCDHB17P-201ENST00000539533 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.43
PCDHB17P-201ENST00000539533 RPL32P62910 135 aaKnown RBP12.4□□□□□ -0.43
PCDHB17P-201ENST00000539533 MAST4O15021 2626 aa12.39□□□□□ -0.43
PCDHB17P-201ENST00000539533 IGIPA6NJ69 53 aa12.39□□□□□ -0.43
PCDHB17P-201ENST00000539533 EMP1P54849 157 aa12.39□□□□□ -0.43
PCDHB17P-201ENST00000539533 C9orf66Q5T8R8 295 aa12.39□□□□□ -0.43
PCDHB17P-201ENST00000539533 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
PCDHB17P-201ENST00000539533 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 HERVK_113P61574 105 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 PAPPA-AS1Q5QFB9 102 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 TEN1Q86WV5 123 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 UBE2D3P61077 147 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 UBE2D2P62837 147 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 PMVKQ15126 192 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
PCDHB17P-201ENST00000539533 IGHV3OR16-12A0A075B7B8 117 aa12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 A0A0J9YY99 117 aa12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 GIG44P09565 113 aaPredicted RBP12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 POLR2KP53803 58 aaKnown RBP12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 A0A087WWL8 130 aa12.37□□□□□ -0.43
PCDHB17P-201ENST00000539533 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 ZNF876PQ49A33 203 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 LYRM7Q5U5X0 104 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 VCYO14598 125 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 TCL1BO95988 128 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 SS18L2Q9UHA2 77 aa12.36□□□□□ -0.43
PCDHB17P-201ENST00000539533 KIR2DL4Q99706 377 aa12.35□□□□□ -0.43
PCDHB17P-201ENST00000539533 TIMM17AQ99595 171 aa12.35□□□□□ -0.43
PCDHB17P-201ENST00000539533 VCX2Q9H322 139 aa12.35□□□□□ -0.43
PCDHB17P-201ENST00000539533 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 A8MWV9 139 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms