RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
LEMD3-202ENST00000539442 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
LEMD3-202ENST00000539442 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
LEMD3-202ENST00000539442 GAGE12JA6NER3 117 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 C5orf52A6NGY3 159 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 I3L3M4 83 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 HSBP1O75506 76 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 GYPEP15421 78 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 GAGE1Q13065 139 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 GAGE4Q13068 117 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 GAGE5Q13069 117 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 VSIG2Q96IQ7 327 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 Q9UF83 564 aa7.46□□□□□ -1.22
LEMD3-202ENST00000539442 TRAV26-1A0A087WT03 109 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 DEFB131BA0A096LNP1 70 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 LOC100131303A0A0U1RQF7 123 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
LEMD3-202ENST00000539442 ORMDL2Q53FV1 153 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 SH2D6Q7Z4S9 175 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 ICOSQ9Y6W8 199 aa7.45□□□□□ -1.22
LEMD3-202ENST00000539442 A0A0J9YY99 117 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 NUPR1O60356 82 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 G0S2P27469 103 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 FCER1GP30273 86 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 COTL1Q14019 142 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 LAGE3Q14657 143 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
LEMD3-202ENST00000539442 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 HIST3H2BBQ8N257 126 aa7.44□□□□□ -1.22
LEMD3-202ENST00000539442 PACRGQ96M98 296 aaPredicted RBP7.44□□□□□ -1.22
LEMD3-202ENST00000539442 LINC01549A6NIU2 74 aa7.43□□□□□ -1.22
LEMD3-202ENST00000539442 TSHBP01222 138 aa7.43□□□□□ -1.22
LEMD3-202ENST00000539442 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
LEMD3-202ENST00000539442 GTSF1LQ9H1H1 148 aa7.43□□□□□ -1.22
LEMD3-202ENST00000539442 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
LEMD3-202ENST00000539442 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 HBDP02042 147 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 S100A2P29034 98 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 AMTP48728 403 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 PHLDA1Q8WV24 401 aaPredicted RBP7.42□□□□□ -1.22
LEMD3-202ENST00000539442 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
LEMD3-202ENST00000539442 A0A096LNJ9 63 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 A0A096LPF7 62 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 NUDT3O95989 172 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
LEMD3-202ENST00000539442 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 BTF3P20290 206 aaKnown RBP7.4□□□□□ -1.22
LEMD3-202ENST00000539442 TIRAPP58753 221 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 PMCHL1Q16048 86 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 CYSLTR1Q9Y271 337 aa7.4□□□□□ -1.22
LEMD3-202ENST00000539442 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 TRBV6-8A0A0A6YYG3 113 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 NTM-AS1Q6ZSK4 140 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 CHCHD7Q9BUK0 85 aa7.39□□□□□ -1.23
LEMD3-202ENST00000539442 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 IFITM10A6NMD0 228 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 H7C423 109 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 FABP4P15090 132 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 DEFB104AQ8WTQ1 72 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
LEMD3-202ENST00000539442 ATP5LO75964 103 aa7.37□□□□□ -1.23
LEMD3-202ENST00000539442 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
LEMD3-202ENST00000539442 LELP1Q5T871 98 aa7.37□□□□□ -1.23
LEMD3-202ENST00000539442 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
LEMD3-202ENST00000539442 IGLL5B9A064 214 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 NPSP0C0P6 89 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 LYPD5Q6UWN5 251 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 ERASQ7Z444 233 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 PYGO1Q9Y3Y4 419 aa7.36□□□□□ -1.23
LEMD3-202ENST00000539442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 IGKV2-29A2NJV5 120 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 UBE2L6O14933 153 aa7.35□□□□□ -1.23
LEMD3-202ENST00000539442 TCTAP57738 103 aa7.35□□□□□ -1.23
LEMD3-202ENST00000539442 PKIAP61925 76 aa7.35□□□□□ -1.23
LEMD3-202ENST00000539442 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 TMEM141Q96I45 108 aa7.35□□□□□ -1.23
LEMD3-202ENST00000539442 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
LEMD3-202ENST00000539442 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms