RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 DEFB121Q5J5C9 76 aa10.62□□□□□ -0.71
CDH20-202ENST00000536675 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
CDH20-202ENST00000536675 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
CDH20-202ENST00000536675 HIVEP3Q5T1R4 2406 aa10.6□□□□□ -0.71
CDH20-202ENST00000536675 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
CDH20-202ENST00000536675 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
CDH20-202ENST00000536675 FAM240AA0A1B0GVK7 77 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 TINCRA0A1B0GVN0 87 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 CFHR3Q02985 330 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 DAND5Q8N907 189 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 Q9UF83 564 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 SMIM20Q8N5G0 67 aa10.59□□□□□ -0.71
CDH20-202ENST00000536675 K7EQG2 157 aa10.58□□□□□ -0.72
CDH20-202ENST00000536675 TMEM95Q3KNT9 176 aa10.58□□□□□ -0.72
CDH20-202ENST00000536675 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
CDH20-202ENST00000536675 CHCHD5Q9BSY4 110 aa10.58□□□□□ -0.72
CDH20-202ENST00000536675 YAE1D1Q9NRH1 226 aa10.58□□□□□ -0.72
CDH20-202ENST00000536675 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
CDH20-202ENST00000536675 TNFRSF18Q9Y5U5 241 aa10.57□□□□□ -0.72
CDH20-202ENST00000536675 HTN1P15515 57 aa10.57□□□□□ -0.72
CDH20-202ENST00000536675 CHCHD7Q9BUK0 85 aa10.57□□□□□ -0.72
CDH20-202ENST00000536675 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
CDH20-202ENST00000536675 RBMY1A1P0DJD3 496 aaKnown RBP10.56□□□□□ -0.72
CDH20-202ENST00000536675 RBMY1CP0DJD4 496 aa10.56□□□□□ -0.72
CDH20-202ENST00000536675 KLRB1Q12918 225 aa10.56□□□□□ -0.72
CDH20-202ENST00000536675 RBMY1FQ15415 496 aaKnown RBP10.56□□□□□ -0.72
CDH20-202ENST00000536675 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
CDH20-202ENST00000536675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
CDH20-202ENST00000536675 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
CDH20-202ENST00000536675 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
CDH20-202ENST00000536675 CITED2Q99967 270 aaPredicted RBP10.56□□□□□ -0.72
CDH20-202ENST00000536675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDH20-202ENST00000536675 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 TIMM17BO60830 172 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 HERV-K104P63124 156 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 MAP1AP78559 2803 aaPredicted RBP10.55□□□□□ -0.72
CDH20-202ENST00000536675 IGHV4-61A0A0C4DH41 118 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 Q6ZSN1 163 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 SPANXA1Q9NS26 97 aa10.55□□□□□ -0.72
CDH20-202ENST00000536675 PRM2P04554 102 aa10.54□□□□□ -0.72
CDH20-202ENST00000536675 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
CDH20-202ENST00000536675 PSMB8P28062 276 aa10.54□□□□□ -0.72
CDH20-202ENST00000536675 LINC00467Q9BRT7 94 aa10.54□□□□□ -0.72
CDH20-202ENST00000536675 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
CDH20-202ENST00000536675 IGF2RP11717 2491 aa10.53□□□□□ -0.72
CDH20-202ENST00000536675 MUC6Q6W4X9 2439 aa10.53□□□□□ -0.72
CDH20-202ENST00000536675 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
CDH20-202ENST00000536675 DUX5Q96PT3 197 aa10.53□□□□□ -0.72
CDH20-202ENST00000536675 NDUFA1O15239 70 aa10.52□□□□□ -0.72
CDH20-202ENST00000536675 RNF152Q8N8N0 203 aa10.52□□□□□ -0.72
CDH20-202ENST00000536675 TMEM101Q96IK0 257 aa10.52□□□□□ -0.72
CDH20-202ENST00000536675 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
CDH20-202ENST00000536675 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
CDH20-202ENST00000536675 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
CDH20-202ENST00000536675 SYNJ2BPP57105 145 aa10.51□□□□□ -0.73
CDH20-202ENST00000536675 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
CDH20-202ENST00000536675 LINC01587Q99440 93 aa10.51□□□□□ -0.73
CDH20-202ENST00000536675 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
CDH20-202ENST00000536675 FAM236AA0A1B0GUQ0 79 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 FAM236BA0A1B0GV22 79 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 COX6A2Q02221 97 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 COX7A2LO14548 114 aa10.49□□□□□ -0.73
CDH20-202ENST00000536675 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
CDH20-202ENST00000536675 ACYP1P07311 99 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 TIRAPP58753 221 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
CDH20-202ENST00000536675 PIMREGQ9BSJ6 248 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 Q9H8V8 135 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 NBL1P41271 181 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 Q8N2B8 174 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 CELSR2Q9HCU4 2923 aa10.48□□□□□ -0.73
CDH20-202ENST00000536675 IMUPQ9GZP8 106 aa10.47□□□□□ -0.73
CDH20-202ENST00000536675 SOSTDC1Q6X4U4 206 aa10.47□□□□□ -0.73
CDH20-202ENST00000536675 RBMY1BA6NDE4 496 aaKnown RBP10.46□□□□□ -0.74
CDH20-202ENST00000536675 RBMY1EA6NEQ0 496 aaKnown RBP10.46□□□□□ -0.74
CDH20-202ENST00000536675 AVPP01185 164 aa10.46□□□□□ -0.74
CDH20-202ENST00000536675 RBMY1DP0C7P1 496 aaKnown RBP10.46□□□□□ -0.74
CDH20-202ENST00000536675 TMEM126AQ9H061 195 aa10.46□□□□□ -0.74
CDH20-202ENST00000536675 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
CDH20-202ENST00000536675 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
CDH20-202ENST00000536675 DAZ2Q13117 558 aaKnown RBP10.45□□□□□ -0.74
CDH20-202ENST00000536675 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
CDH20-202ENST00000536675 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
CDH20-202ENST00000536675 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
CDH20-202ENST00000536675 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
CDH20-202ENST00000536675 CREBBPQ92793 2442 aa10.45□□□□□ -0.74
CDH20-202ENST00000536675 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 IGHV4-59P01825 116 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 DEFB131AP59861 70 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 LINC00643Q86TS7 51 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 DNAJC30Q96LL9 226 aa10.44□□□□□ -0.74
CDH20-202ENST00000536675 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms