RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
TNFRSF1A-207ENST00000535958 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
TNFRSF1A-207ENST00000535958 GFRA4Q9GZZ7 299 aa8.2□□□□□ -1.1
TNFRSF1A-207ENST00000535958 F2Z2F3 143 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 SLPIP03973 132 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 CENPWQ5EE01 88 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 STPG4Q8N801 248 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 LYPD6BQ8NI32 183 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
TNFRSF1A-207ENST00000535958 IFNA1P01562 189 aa8.18□□□□□ -1.1
TNFRSF1A-207ENST00000535958 GNG4P50150 75 aa8.18□□□□□ -1.1
TNFRSF1A-207ENST00000535958 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-207ENST00000535958 LINC01600Q96MT4 127 aa8.18□□□□□ -1.1
TNFRSF1A-207ENST00000535958 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
TNFRSF1A-207ENST00000535958 TNXBP22105 4242 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 KANTRA0A1W2PQU2 76 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 TEX46H3BTG2 121 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 ZNF345Q14585 488 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 RNASEKQ6P5S7 137 aaKnown RBP8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 PRSS3P2Q8NHM4 247 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 BIN3Q9NQY0 253 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
TNFRSF1A-207ENST00000535958 APCSP02743 223 aa8.16□□□□□ -1.1
TNFRSF1A-207ENST00000535958 LRP2P98164 4655 aa8.16□□□□□ -1.1
TNFRSF1A-207ENST00000535958 LYZL1Q6UWQ5 148 aa8.16□□□□□ -1.1
TNFRSF1A-207ENST00000535958 CHCHD10Q8WYQ3 142 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-207ENST00000535958 SMIM12Q96EX1 92 aa8.16□□□□□ -1.1
TNFRSF1A-207ENST00000535958 GVQW2A0A096LPI5 108 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 G3V3Q6 166 aa8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 NTF3P20783 257 aa8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 TWIST1Q15672 202 aa8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 C11orf52Q96A22 123 aa8.15□□□□□ -1.1
TNFRSF1A-207ENST00000535958 A0A0J9YXV3 536 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 BCL2L11O43521 198 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 CCL20P78556 96 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 TMEM101Q96IK0 257 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 BTF3L4Q96K17 158 aa8.14□□□□□ -1.11
TNFRSF1A-207ENST00000535958 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 A0A096LNI7 61 aa8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 C19orf71A6NCJ1 209 aa8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 NCR2O95944 276 aa8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 BATF3Q9NR55 127 aa8.13□□□□□ -1.11
TNFRSF1A-207ENST00000535958 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 H7C423 109 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 PDE6DO43924 150 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 XCL1P47992 114 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 RGS21Q2M5E4 152 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 Q6ZRP5 223 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 CARD19Q96LW7 228 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 MED9Q9NWA0 146 aa8.12□□□□□ -1.11
TNFRSF1A-207ENST00000535958 RAB19A4D1S5 217 aa8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 FGF6P10767 208 aa8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 ZNF25P17030 456 aaPredicted RBP8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 CTRLP40313 264 aa8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 Q6ZNX1 250 aa8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
TNFRSF1A-207ENST00000535958 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 HMSDA8MTL9 139 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 EIF5AL1Q6IS14 154 aaKnown RBP8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 TEX261Q6UWH6 196 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 C9orf62Q8N4C0 152 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
TNFRSF1A-207ENST00000535958 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 PMCHP20382 165 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 FOXI1Q12951 378 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 ODF1Q14990 250 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 SS18Q15532 418 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 ISOC2Q96AB3 205 aa8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 RPP21Q9H633 154 aaKnown RBP8.09□□□□□ -1.11
TNFRSF1A-207ENST00000535958 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
TNFRSF1A-207ENST00000535958 CCL25O15444 150 aa8.08□□□□□ -1.12
TNFRSF1A-207ENST00000535958 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
TNFRSF1A-207ENST00000535958 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
TNFRSF1A-207ENST00000535958 I3L3M4 83 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 MALP21145 153 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 LINC00526Q96FQ7 95 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 MRAP2Q96G30 205 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
TNFRSF1A-207ENST00000535958 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
TNFRSF1A-207ENST00000535958 BCL2P10415 239 aa8.06□□□□□ -1.12
TNFRSF1A-207ENST00000535958 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
TNFRSF1A-207ENST00000535958 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
TNFRSF1A-207ENST00000535958 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
TNFRSF1A-207ENST00000535958 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
TNFRSF1A-207ENST00000535958 FAM231BA6NCW3 169 aa8.05□□□□□ -1.12
TNFRSF1A-207ENST00000535958 CAMPP49913 170 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms