RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 CEP152O94986 1710 aa-0.35□□□□□ -2.47
CCDC7-207ENST00000535327 RPS25P62851 125 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-207ENST00000535327 SMCO1Q147U7 214 aa-0.36□□□□□ -2.47
CCDC7-207ENST00000535327 SMIM21Q3B7S5 101 aa-0.36□□□□□ -2.47
CCDC7-207ENST00000535327 TMEM191AQ9H0A3 160 aa-0.36□□□□□ -2.47
CCDC7-207ENST00000535327 KMT2AQ03164 3969 aa-0.36□□□□□ -2.47
CCDC7-207ENST00000535327 ALX1Q15699 326 aa-0.37□□□□□ -2.47
CCDC7-207ENST00000535327 CCDC167Q9P0B6 97 aa-0.37□□□□□ -2.47
CCDC7-207ENST00000535327 PLXNB2O15031 1838 aa-0.37□□□□□ -2.47
CCDC7-207ENST00000535327 ZNF518AQ6AHZ1 1483 aa-0.37□□□□□ -2.47
CCDC7-207ENST00000535327 SPTBN1Q01082 2364 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-207ENST00000535327 SMIM4Q8WVI0 70 aa-0.38□□□□□ -2.47
CCDC7-207ENST00000535327 IFT140Q96RY7 1462 aa-0.38□□□□□ -2.47
CCDC7-207ENST00000535327 UNC13AQ9UPW8 1703 aa-0.38□□□□□ -2.47
CCDC7-207ENST00000535327 CASKIN1Q8WXD9 1431 aa-0.38□□□□□ -2.47
CCDC7-207ENST00000535327 KDM3BQ7LBC6 1761 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 SIX6O95475 246 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 PPP1R17O96001 155 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 CCL18P55774 89 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 Q5VSD8 79 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 AQP10Q96PS8 301 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 PFDN5Q99471 154 aa-0.39□□□□□ -2.47
CCDC7-207ENST00000535327 PXDNQ92626 1479 aa-0.4□□□□□ -2.47
CCDC7-207ENST00000535327 Q8IZM0 81 aa-0.4□□□□□ -2.47
CCDC7-207ENST00000535327 COPS9Q8WXC6 57 aa-0.4□□□□□ -2.47
CCDC7-207ENST00000535327 PRDM2Q13029 1718 aa-0.41□□□□□ -2.47
CCDC7-207ENST00000535327 USF3Q68DE3 2245 aa-0.42□□□□□ -2.48
CCDC7-207ENST00000535327 TRAV13-2A0A0B4J235 113 aa-0.42□□□□□ -2.48
CCDC7-207ENST00000535327 SDF2Q99470 211 aa-0.42□□□□□ -2.48
CCDC7-207ENST00000535327 LRP2P98164 4655 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 PPRC1Q5VV67 1664 aaKnown RBP-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 CTXND1A0A1B0GTU2 59 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 HCG22E2RYF7 251 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 M0R135 149 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 HAMPP81172 84 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 C10orf128Q5T292 105 aa-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 PAIP2BQ9ULR5 123 aaKnown RBP-0.43□□□□□ -2.48
CCDC7-207ENST00000535327 FLNAP21333 2647 aaKnown RBP-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 DPH3Q96FX2 82 aa-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 PDCD10Q9BUL8 212 aa-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 DOCK2Q92608 1830 aa-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 CSMD3Q7Z407 3707 aa-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 HSPG2P98160 4391 aa-0.44□□□□□ -2.48
CCDC7-207ENST00000535327 MYOM3Q5VTT5 1437 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 SPAARA0A1B0GVQ0 90 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 SPRR2DP22532 72 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 C12orf73Q69YU5 71 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 MYO7BQ6PIF6 2116 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 LENEPQ9Y5L5 61 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 LRRC37A2A6NM11 1700 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 PKD1L1Q8TDX9 2849 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 ERCC6L2Q5T890 1561 aa-0.45□□□□□ -2.48
CCDC7-207ENST00000535327 BCE1O60756 84 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 SPRR1AP35321 89 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 DCDP81605 110 aaKnown RBP-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 SPAG11BQ08648 103 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 SPAG11AQ6PDA7 123 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 MUC2Q02817 5179 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 PATJQ8NI35 1801 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 MUC12Q9UKN1 5478 aa-0.46□□□□□ -2.48
CCDC7-207ENST00000535327 MRC1P22897 1456 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 HIST1H1DP16402 221 aaKnown RBP-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 ARPC4P59998 168 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 RBM3P98179 157 aaKnown RBP-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 COX17Q14061 63 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 TTC9CQ8N5M4 171 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 V9GYH0 126 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 STAB1Q9NY15 2570 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 LPAP08519 4548 aa-0.47□□□□□ -2.48
CCDC7-207ENST00000535327 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.47□□□□□ -2.49
CCDC7-207ENST00000535327 MYCBP2O75592 4640 aa-0.47□□□□□ -2.49
CCDC7-207ENST00000535327 GRIN2AQ12879 1464 aa-0.48□□□□□ -2.49
CCDC7-207ENST00000535327 CSPG4Q6UVK1 2322 aa-0.48□□□□□ -2.49
CCDC7-207ENST00000535327 LRP6O75581 1613 aa-0.48□□□□□ -2.49
CCDC7-207ENST00000535327 TP53AIP1Q9HCN2 124 aa-0.48□□□□□ -2.49
CCDC7-207ENST00000535327 VWFP04275 2813 aa-0.48□□□□□ -2.49
CCDC7-207ENST00000535327 DOCK1Q14185 1865 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 LOC105371267A0A1B0GV96 52 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 TMEM170BQ5T4T1 132 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 AGPAT4-IT1Q9H0P7 198 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 CHD6Q8TD26 2715 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 ZANQ9Y493 2812 aa-0.49□□□□□ -2.49
CCDC7-207ENST00000535327 FXYD6-FXYD2A0A087WZ82 144 aa-0.5□□□□□ -2.49
CCDC7-207ENST00000535327 PPIP5K1Q6PFW1 1433 aa-0.5□□□□□ -2.49
CCDC7-207ENST00000535327 CFTRP13569 1480 aa-0.5□□□□□ -2.49
CCDC7-207ENST00000535327 ARAP2Q8WZ64 1704 aa-0.5□□□□□ -2.49
CCDC7-207ENST00000535327 SBF2Q86WG5 1849 aa-0.5□□□□□ -2.49
CCDC7-207ENST00000535327 MAP1BP46821 2468 aaKnown RBP-0.51□□□□□ -2.49
CCDC7-207ENST00000535327 PIGYQ3MUY2 71 aa-0.51□□□□□ -2.49
CCDC7-207ENST00000535327 RERGLQ9H628 205 aa-0.51□□□□□ -2.49
CCDC7-207ENST00000535327 BSNQ9UPA5 3926 aa-0.51□□□□□ -2.49
CCDC7-207ENST00000535327 C10orf71Q711Q0 1435 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 FAM25AB3EWG3 89 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 FAM25CB3EWG5 89 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 FAM25GB3EWG6 89 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 PRM1P04553 51 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 TNXBP22105 4242 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 ZNF236Q9UL36 1845 aa-0.52□□□□□ -2.49
CCDC7-207ENST00000535327 MYH7P12883 1935 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms