RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
PHRF1-205ENST00000533464 C15orf53Q8NAA6 179 aa13.19□□□□□ -0.3
PHRF1-205ENST00000533464 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
PHRF1-205ENST00000533464 Q6ZUT4 128 aa13.19□□□□□ -0.3
PHRF1-205ENST00000533464 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
PHRF1-205ENST00000533464 DOPEY1Q5JWR5 2465 aa13.19□□□□□ -0.3
PHRF1-205ENST00000533464 C9orf153Q5TBE3 101 aa13.18□□□□□ -0.3
PHRF1-205ENST00000533464 SPTBN4Q9H254 2564 aa13.18□□□□□ -0.3
PHRF1-205ENST00000533464 PRO0255Q9UI72 69 aa13.18□□□□□ -0.3
PHRF1-205ENST00000533464 INSL3P51460 131 aa13.18□□□□□ -0.3
PHRF1-205ENST00000533464 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
PHRF1-205ENST00000533464 RS1O15537 224 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 CRYBA4P53673 196 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 Q6ZSV7 163 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 H0YGX0 51 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 CCL18P55774 89 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 TP73-AS1Q9UF72 201 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
PHRF1-205ENST00000533464 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
PHRF1-205ENST00000533464 KLK12Q9UKR0 248 aa13.15□□□□□ -0.3
PHRF1-205ENST00000533464 TEN1Q86WV5 123 aa13.15□□□□□ -0.31
PHRF1-205ENST00000533464 PSMB8P28062 276 aa13.14□□□□□ -0.31
PHRF1-205ENST00000533464 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
PHRF1-205ENST00000533464 RNF185Q96GF1 192 aa13.14□□□□□ -0.31
PHRF1-205ENST00000533464 MIR7-3HGQ8N6C7 128 aa13.14□□□□□ -0.31
PHRF1-205ENST00000533464 Q6ZS46 218 aa13.14□□□□□ -0.31
PHRF1-205ENST00000533464 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
PHRF1-205ENST00000533464 UBE2BP63146 152 aa13.13□□□□□ -0.31
PHRF1-205ENST00000533464 DEFB105AQ8NG35 78 aa13.13□□□□□ -0.31
PHRF1-205ENST00000533464 NEXN-AS1Q8NBZ9 246 aa13.13□□□□□ -0.31
PHRF1-205ENST00000533464 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
PHRF1-205ENST00000533464 HIST2H2BDQ6DRA6 164 aa13.12□□□□□ -0.31
PHRF1-205ENST00000533464 ATG2AQ2TAZ0 1938 aa13.12□□□□□ -0.31
PHRF1-205ENST00000533464 SPAG11BQ08648 103 aa13.11□□□□□ -0.31
PHRF1-205ENST00000533464 C11orf21Q9P2W6 132 aa13.11□□□□□ -0.31
PHRF1-205ENST00000533464 U3KQK5 164 aa13.11□□□□□ -0.31
PHRF1-205ENST00000533464 NDUFA11Q86Y39 141 aa13.1□□□□□ -0.31
PHRF1-205ENST00000533464 NDUFA1O15239 70 aa13.1□□□□□ -0.31
PHRF1-205ENST00000533464 LINC00467Q9BRT7 94 aa13.1□□□□□ -0.31
PHRF1-205ENST00000533464 M0QY20 66 aa13.1□□□□□ -0.31
PHRF1-205ENST00000533464 CLEC2BQ92478 149 aa13.1□□□□□ -0.31
PHRF1-205ENST00000533464 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
PHRF1-205ENST00000533464 PSMG3-AS1Q96PY0 264 aa13.09□□□□□ -0.31
PHRF1-205ENST00000533464 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-205ENST00000533464 PRR9Q5T870 116 aa13.09□□□□□ -0.31
PHRF1-205ENST00000533464 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
PHRF1-205ENST00000533464 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 A0A0J9YXY3 114 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
PHRF1-205ENST00000533464 CXCL5P42830 114 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 FAM222AQ5U5X8 452 aa13.08□□□□□ -0.32
PHRF1-205ENST00000533464 LECT2O14960 151 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 IGLV4-3A0A075B6K6 122 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 INAFM1C9JVW0 142 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 ACYP1P07311 99 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
PHRF1-205ENST00000533464 PROK1P58294 105 aa13.07□□□□□ -0.32
PHRF1-205ENST00000533464 TRAV26-1A0A087WT03 109 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 NCR3O14931 201 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 CFAP126Q5VTH2 177 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 AVPP01185 164 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 PTH2Q96A98 100 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 MIAQ16674 131 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
PHRF1-205ENST00000533464 FOXI1Q12951 378 aa13.06□□□□□ -0.32
PHRF1-205ENST00000533464 DNAH12Q6ZR08 3092 aa13.05□□□□□ -0.32
PHRF1-205ENST00000533464 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
PHRF1-205ENST00000533464 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
PHRF1-205ENST00000533464 UTRNP46939 3433 aa13.04□□□□□ -0.32
PHRF1-205ENST00000533464 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
PHRF1-205ENST00000533464 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
PHRF1-205ENST00000533464 hADV29S1A0JD25 119 aa13.04□□□□□ -0.32
PHRF1-205ENST00000533464 NRACQ8N912 160 aa13.04□□□□□ -0.32
PHRF1-205ENST00000533464 TRBV27A0A0K0K1C4 114 aa13.03□□□□□ -0.32
PHRF1-205ENST00000533464 A0A1W2PPR1 153 aa13.03□□□□□ -0.32
PHRF1-205ENST00000533464 LINC00269Q8N2A0 174 aa13.03□□□□□ -0.32
PHRF1-205ENST00000533464 KLLNB2CW77 178 aa13.03□□□□□ -0.32
PHRF1-205ENST00000533464 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
PHRF1-205ENST00000533464 CEP350Q5VT06 3117 aa13.02□□□□□ -0.32
PHRF1-205ENST00000533464 TM2D2Q9BX73 214 aa13.02□□□□□ -0.32
PHRF1-205ENST00000533464 H3BT86 120 aa13.02□□□□□ -0.33
PHRF1-205ENST00000533464 LINC00482Q8N8I6 264 aa13.02□□□□□ -0.33
PHRF1-205ENST00000533464 LINC01006Q8NI28 216 aa13.02□□□□□ -0.33
PHRF1-205ENST00000533464 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
PHRF1-205ENST00000533464 DCANP1Q8TF63 244 aa13.01□□□□□ -0.33
PHRF1-205ENST00000533464 TCL1BO95988 128 aa13.01□□□□□ -0.33
PHRF1-205ENST00000533464 TMEM223A0PJW6 202 aa13□□□□□ -0.33
PHRF1-205ENST00000533464 LRRK2Q5S007 2527 aa13□□□□□ -0.33
PHRF1-205ENST00000533464 TIRAPP58753 221 aa13□□□□□ -0.33
PHRF1-205ENST00000533464 TRBV6-5A0A0K0K1A5 114 aa13□□□□□ -0.33
PHRF1-205ENST00000533464 TRACP01848 142 aa13□□□□□ -0.33
PHRF1-205ENST00000533464 MRPS12O15235 138 aaKnown RBP13□□□□□ -0.33
PHRF1-205ENST00000533464 LYRM9A8MSI8 78 aa12.99□□□□□ -0.33
PHRF1-205ENST00000533464 PRM2P04554 102 aa12.99□□□□□ -0.33
PHRF1-205ENST00000533464 REG3AQ06141 175 aa12.99□□□□□ -0.33
PHRF1-205ENST00000533464 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms