RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 IGKV2D-24A0A075B6R9 120 aa15.02■□□□□ -0
PKP3-210ENST00000533249 A0A1B0GUT8 65 aa15.02■□□□□ -0
PKP3-210ENST00000533249 CTRLP40313 264 aa15.02■□□□□ -0
PKP3-210ENST00000533249 FOXA3P55318 350 aaPredicted RBP15.02■□□□□ -0
PKP3-210ENST00000533249 TWIST1Q15672 202 aa15.02■□□□□ -0
PKP3-210ENST00000533249 OR10AG1Q8NH19 301 aa15.02■□□□□ -0
PKP3-210ENST00000533249 SSBP4Q9BWG4 385 aaPredicted RBP15.02■□□□□ -0
PKP3-210ENST00000533249 KLK12Q9UKR0 248 aa15.02■□□□□ -0
PKP3-210ENST00000533249 A0A087WWL8 130 aa15.01□□□□□ -0.01
PKP3-210ENST00000533249 WDR73Q6P4I2 378 aa15.01□□□□□ -0.01
PKP3-210ENST00000533249 SCXQ7RTU7 201 aa15.01□□□□□ -0.01
PKP3-210ENST00000533249 BTF3L4Q96K17 158 aa15.01□□□□□ -0.01
PKP3-210ENST00000533249 SMIM15Q7Z3B0 74 aa15□□□□□ -0.01
PKP3-210ENST00000533249 Q8N976 141 aa15□□□□□ -0.01
PKP3-210ENST00000533249 UBE2WQ96B02 151 aa15□□□□□ -0.01
PKP3-210ENST00000533249 MRPL54Q6P161 138 aaKnown RBP14.99□□□□□ -0.01
PKP3-210ENST00000533249 DEFB104AQ8WTQ1 72 aa14.99□□□□□ -0.01
PKP3-210ENST00000533249 TRAV9-1A0A075B6T8 112 aa14.98□□□□□ -0.01
PKP3-210ENST00000533249 A0A087WX48 190 aa14.98□□□□□ -0.01
PKP3-210ENST00000533249 KRTAP29-1A8MX34 341 aaPredicted RBP14.98□□□□□ -0.01
PKP3-210ENST00000533249 NTF3P20783 257 aa14.98□□□□□ -0.01
PKP3-210ENST00000533249 S100A8P05109 93 aa14.97□□□□□ -0.01
PKP3-210ENST00000533249 TRGC1P0CF51 173 aa14.97□□□□□ -0.01
PKP3-210ENST00000533249 SMIM17P0DL12 118 aa14.97□□□□□ -0.01
PKP3-210ENST00000533249 CBLN2Q8IUK8 224 aa14.97□□□□□ -0.01
PKP3-210ENST00000533249 A0A1B0GW15 77 aa14.96□□□□□ -0.01
PKP3-210ENST00000533249 SCO1O75880 301 aa14.96□□□□□ -0.01
PKP3-210ENST00000533249 CAMPP49913 170 aa14.96□□□□□ -0.01
PKP3-210ENST00000533249 RPL36AP83881 106 aaKnown RBP14.95□□□□□ -0.02
PKP3-210ENST00000533249 ELOBQ15370 118 aa14.95□□□□□ -0.02
PKP3-210ENST00000533249 ATP5L2Q7Z4Y8 100 aa14.95□□□□□ -0.02
PKP3-210ENST00000533249 RPL36ALQ969Q0 106 aaKnown RBP14.95□□□□□ -0.02
PKP3-210ENST00000533249 AP1S3Q96PC3 154 aa14.95□□□□□ -0.02
PKP3-210ENST00000533249 CNFNQ9BYD5 112 aa14.95□□□□□ -0.02
PKP3-210ENST00000533249 RAB4BP61018 213 aa14.94□□□□□ -0.02
PKP3-210ENST00000533249 HBBP68871 147 aa14.94□□□□□ -0.02
PKP3-210ENST00000533249 CHCHD7Q9BUK0 85 aa14.94□□□□□ -0.02
PKP3-210ENST00000533249 CHAC1Q9BUX1 264 aa14.94□□□□□ -0.02
PKP3-210ENST00000533249 TRBV10-1A0A0K0K1A3 114 aa14.93□□□□□ -0.02
PKP3-210ENST00000533249 UBE2D3P61077 147 aa14.92□□□□□ -0.02
PKP3-210ENST00000533249 UBE2D2P62837 147 aa14.92□□□□□ -0.02
PKP3-210ENST00000533249 TRBV7-3A0A075B6L6 115 aa14.91□□□□□ -0.02
PKP3-210ENST00000533249 TGIF2-C20orf24A0A0A6YYL0 155 aa14.91□□□□□ -0.02
PKP3-210ENST00000533249 TMEM262E9PQX1 116 aa14.91□□□□□ -0.02
PKP3-210ENST00000533249 CIRBP-AS1Q8TBR5 109 aa14.91□□□□□ -0.02
PKP3-210ENST00000533249 Q0VG73 95 aa14.9□□□□□ -0.02
PKP3-210ENST00000533249 C1orf43Q9BWL3 253 aa14.9□□□□□ -0.02
PKP3-210ENST00000533249 MGPP08493 103 aa14.89□□□□□ -0.03
PKP3-210ENST00000533249 COX19Q49B96 90 aa14.89□□□□□ -0.03
PKP3-210ENST00000533249 RASL11AQ6T310 242 aa14.89□□□□□ -0.03
PKP3-210ENST00000533249 DPH3P1Q9H4G8 78 aa14.89□□□□□ -0.03
PKP3-210ENST00000533249 TRBV24-1A0A075B6N3 115 aa14.88□□□□□ -0.03
PKP3-210ENST00000533249 TRBV6-8A0A0A6YYG3 113 aa14.88□□□□□ -0.03
PKP3-210ENST00000533249 A0A1B0GXF2 115 aa14.88□□□□□ -0.03
PKP3-210ENST00000533249 F5H697 171 aa14.88□□□□□ -0.03
PKP3-210ENST00000533249 KRTAP10-4P60372 401 aaPredicted RBP14.88□□□□□ -0.03
PKP3-210ENST00000533249 ZNF56Q15929 161 aa14.88□□□□□ -0.03
PKP3-210ENST00000533249 CRPP02741 224 aa14.87□□□□□ -0.03
PKP3-210ENST00000533249 C14orf177Q52M58 125 aa14.87□□□□□ -0.03
PKP3-210ENST00000533249 ENHOQ6UWT2 76 aa14.87□□□□□ -0.03
PKP3-210ENST00000533249 TMEM191AQ9H0A3 160 aa14.87□□□□□ -0.03
PKP3-210ENST00000533249 MPV17L2Q567V2 206 aa14.86□□□□□ -0.03
PKP3-210ENST00000533249 NEXN-AS1Q8NBZ9 246 aa14.86□□□□□ -0.03
PKP3-210ENST00000533249 ANGP03950 147 aaKnown RBP14.85□□□□□ -0.03
PKP3-210ENST00000533249 LRP1Q07954 4544 aaKnown RBP14.84□□□□□ -0.03
PKP3-210ENST00000533249 CHCHD5Q9BSY4 110 aa14.84□□□□□ -0.03
PKP3-210ENST00000533249 HLA-DQA1P01909 254 aa14.83□□□□□ -0.04
PKP3-210ENST00000533249 YPEL4Q96NS1 127 aa14.83□□□□□ -0.04
PKP3-210ENST00000533249 GNB1LQ9BYB4 327 aa14.83□□□□□ -0.04
PKP3-210ENST00000533249 USP17L23D6RBM5 183 aa14.82□□□□□ -0.04
PKP3-210ENST00000533249 MT-ND6P03923 174 aa14.82□□□□□ -0.04
PKP3-210ENST00000533249 TMEM136Q6ZRR5 245 aa14.82□□□□□ -0.04
PKP3-210ENST00000533249 AMN1Q8IY45 258 aa14.82□□□□□ -0.04
PKP3-210ENST00000533249 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.82□□□□□ -0.04
PKP3-210ENST00000533249 APCSP02743 223 aa14.81□□□□□ -0.04
PKP3-210ENST00000533249 RPS10P46783 165 aaKnown RBP14.81□□□□□ -0.04
PKP3-210ENST00000533249 FAM104BQ5XKR9 115 aa14.81□□□□□ -0.04
PKP3-210ENST00000533249 GATD1Q8NB37 220 aa14.81□□□□□ -0.04
PKP3-210ENST00000533249 TRAPPC1Q9Y5R8 145 aa14.81□□□□□ -0.04
PKP3-210ENST00000533249 KIF25-AS1Q9Y6Z4 181 aa14.81□□□□□ -0.04
PKP3-210ENST00000533249 COLCA2A8K830 154 aa14.8□□□□□ -0.04
PKP3-210ENST00000533249 FABP9Q0Z7S8 132 aa14.8□□□□□ -0.04
PKP3-210ENST00000533249 SERTAD4-AS1Q5TG53 156 aa14.8□□□□□ -0.04
PKP3-210ENST00000533249 H7C1H1 209 aa14.79□□□□□ -0.04
PKP3-210ENST00000533249 OXTP01178 125 aa14.79□□□□□ -0.04
PKP3-210ENST00000533249 RAB4AP20338 218 aa14.79□□□□□ -0.04
PKP3-210ENST00000533249 MRPL18Q9H0U6 180 aaKnown RBP14.79□□□□□ -0.04
PKP3-210ENST00000533249 RAB5AP20339 215 aa14.78□□□□□ -0.04
PKP3-210ENST00000533249 PKIAP61925 76 aa14.78□□□□□ -0.04
PKP3-210ENST00000533249 CLPSL2Q6UWE3 100 aa14.78□□□□□ -0.04
PKP3-210ENST00000533249 PRSS1P07477 247 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 CKS2P33552 79 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 RPL37AP61513 92 aaKnown RBP14.77□□□□□ -0.05
PKP3-210ENST00000533249 MIAQ16674 131 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 MRPL51Q4U2R6 128 aaKnown RBP14.77□□□□□ -0.05
PKP3-210ENST00000533249 SUMO4Q6EEV6 95 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 NTM-AS1Q6ZSK4 140 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 MRAP2Q96G30 205 aa14.77□□□□□ -0.05
PKP3-210ENST00000533249 GAGE6Q13070 117 aa14.76□□□□□ -0.05
PKP3-210ENST00000533249 RNF185Q96GF1 192 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms