RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PDCD11Q14690 1871 aaKnown RBP2□□□□□ -2.09
PTPRK-220ENST00000531466 TULP4Q9NRJ4 1543 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 SIPA1L3O60292 1781 aaPredicted RBP2□□□□□ -2.09
PTPRK-220ENST00000531466 UBR1Q8IWV7 1749 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 SCN9AQ15858 1988 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 C3P01024 1663 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 IQGAP1P46940 1657 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 NHSQ6T4R5 1651 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 ABCC8Q09428 1581 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 AFDNP55196 1824 aaKnown RBP1.99□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.99□□□□□ -2.09
PTPRK-220ENST00000531466 TRAV22A0A0B4J277 110 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 TMEM30CPA0ZSE6 113 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 SDHAF1A6NFY7 115 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 TMEM14DPA8MWL7 114 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 H3BPC8 53 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 FAM27BQ5VT28 67 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 C2orf82Q6UX34 121 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 NTM-AS1Q6ZSK4 140 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 C15orf56Q8N910 161 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 MAST2Q6P0Q8 1798 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 PKD1L3Q7Z443 1732 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 FMN2Q9NZ56 1722 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 TICRRQ7Z2Z1 1910 aa1.99□□□□□ -2.09
PTPRK-220ENST00000531466 ATAD5Q96QE3 1844 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 STRCP1A6NGW2 1772 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 LOC285556D6RIA3 1793 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 PTPRBP23467 1997 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 EML6Q6ZMW3 1958 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 NUP188Q5SRE5 1749 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV4-69A0A075B6H9 119 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 A0A087WSZ3 146 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 E7EUB6 86 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 CHKB-CPT1BH3BT56 60 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 CLPSP04118 112 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 TLX1NBP0CAT3 122 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 SAA2P0DJI9 122 aaPredicted RBP1.98□□□□□ -2.09
PTPRK-220ENST00000531466 MGST1P10620 155 aaKnown RBP1.98□□□□□ -2.09
PTPRK-220ENST00000531466 UBE2D1P51668 147 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 NNATQ16517 81 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 C1orf134Q5TEV5 83 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 NCBP2-AS2Q69YL0 99 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 Q6ZQT0 140 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 Q6ZS52 159 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 MIR7-3HGQ8N6C7 128 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 UBE2D4Q9Y2X8 147 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 FAM215AQ9Y5M1 114 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 U3KQK5 164 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 CD163L1Q9NR16 1453 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 KIF21BO75037 1637 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 PAPPAQ13219 1627 aa1.98□□□□□ -2.09
PTPRK-220ENST00000531466 PHRF1Q9P1Y6 1649 aaKnown RBP1.98□□□□□ -2.09
PTPRK-220ENST00000531466 TRPM7Q96QT4 1865 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 TANC1Q9C0D5 1861 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
PTPRK-220ENST00000531466 COL5A1P20908 1838 aaPredicted RBP1.97□□□□□ -2.09
PTPRK-220ENST00000531466 TMSB15BA0A087X1C1 80 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 FAM223BA6NKX1 122 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 PPYP01298 95 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 ELOF1P60002 83 aaKnown RBP1.97□□□□□ -2.09
PTPRK-220ENST00000531466 C10orf128Q5T292 105 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 Q5VV11 94 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 ADM2Q7Z4H4 148 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 CIRBP-AS1Q8TBR5 109 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 C22orf24Q9Y442 160 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 ANKRD36CQ5JPF3 1778 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 PLXNB3Q9ULL4 1909 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 DSCAML1Q8TD84 2053 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 TJP1Q07157 1748 aa1.97□□□□□ -2.09
PTPRK-220ENST00000531466 ATG2BQ96BY7 2078 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 A0A096LNJ9 63 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TRAV1-2A0A0B4J238 106 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TEX49A0A1B0GTD5 131 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 HIGD1CA8MV81 97 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 B4DSR2 109 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 HCRTO43612 131 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 SNRPGP62308 76 aaKnown RBP1.96□□□□□ -2.1
PTPRK-220ENST00000531466 C1orf64Q8NEQ6 169 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 TMEM14BQ9NUH8 114 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 SAMD9LQ8IVG5 1584 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 C5P01031 1676 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 THADAQ6YHU6 1953 aa1.96□□□□□ -2.1
PTPRK-220ENST00000531466 NHSL1Q5SYE7 1610 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 PLXNA1Q9UIW2 1896 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 IGKV1OR2-108A0A075B7D4 117 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV1-18A0A0C4DH31 117 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 TRBV10-1A0A0K0K1A3 114 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 LOC101927531A0A1B0GV80 90 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 LINC01549A6NIU2 74 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 C17orf98A8MV24 154 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 H3BQ85 93 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 DNAL4O96015 105 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 LHBP01229 141 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3-53P01767 116 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 IGKV4-1P06312 121 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms