RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
CTNND1-221ENST00000529873 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-221ENST00000529873 EP300Q09472 2414 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-221ENST00000529873 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
CTNND1-221ENST00000529873 PI4KAP42356 2102 aa6.4□□□□□ -1.38
CTNND1-221ENST00000529873 LINC01548A6NM66 108 aa6.4□□□□□ -1.38
CTNND1-221ENST00000529873 LY6LH3BQJ8 138 aa6.4□□□□□ -1.38
CTNND1-221ENST00000529873 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
CTNND1-221ENST00000529873 SDK2Q58EX2 2172 aa6.4□□□□□ -1.39
CTNND1-221ENST00000529873 Q8N9L7 120 aa6.4□□□□□ -1.39
CTNND1-221ENST00000529873 IGLV2-8P01709 118 aa6.4□□□□□ -1.39
CTNND1-221ENST00000529873 REG3AQ06141 175 aa6.4□□□□□ -1.39
CTNND1-221ENST00000529873 P0DMU3 169 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 HILS1P60008 231 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 TNRC6AQ8NDV7 1962 aaKnown RBP6.39□□□□□ -1.39
CTNND1-221ENST00000529873 C11orf71Q6IPW1 123 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 SDIM1Q6ZPB5 146 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-221ENST00000529873 ALPK2Q86TB3 2170 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 INTS1Q8N201 2190 aaKnown RBP6.39□□□□□ -1.39
CTNND1-221ENST00000529873 DEFB114Q30KQ6 69 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 CEMP1Q6PRD7 247 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-221ENST00000529873 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 UFSP1Q6NVU6 142 aa6.39□□□□□ -1.39
CTNND1-221ENST00000529873 XGP55808 180 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 Q6ZTI0 123 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 MUC22E2RYF6 1773 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-221ENST00000529873 K7EQG2 157 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 BRWD1-AS2P59051 145 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 CACNA1EQ15878 2313 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 FRMD6-AS1P0C7T7 363 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 CEP250Q9BV73 2442 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 LOC107984640A0A0U1RRK4 108 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 TCL1BO95988 128 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
CTNND1-221ENST00000529873 ENHOQ6UWT2 76 aa6.38□□□□□ -1.39
CTNND1-221ENST00000529873 EBI3Q14213 229 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 CRYGDP07320 174 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 CRIP3Q6Q6R5 217 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 DOCK10Q96BY6 2186 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 Q6ZPA2 131 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 LINC00322Q6ZN03 302 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-221ENST00000529873 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-221ENST00000529873 YPEL4Q96NS1 127 aa6.37□□□□□ -1.39
CTNND1-221ENST00000529873 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 CFAP126Q5VTH2 177 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 U3KQK5 164 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 GDF5OSQ5U4N7 250 aa6.36□□□□□ -1.39
CTNND1-221ENST00000529873 MYO7BQ6PIF6 2116 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 ZNF843Q8N446 348 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 MIFP14174 115 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 POLEQ07864 2286 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 TRBV27A0A0K0K1C4 114 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
CTNND1-221ENST00000529873 DEFB131BA0A096LNP1 70 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 Q6ZSV7 163 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 PRO3102Q9H379 93 aa6.34□□□□□ -1.39
CTNND1-221ENST00000529873 MED12Q93074 2177 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 CD164Q04900 197 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
CTNND1-221ENST00000529873 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 LY6G6DO95868 133 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 M0QY20 66 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 ABCA4P78363 2273 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 IBA57-AS1B1ANH7 110 aa6.32□□□□□ -1.4
CTNND1-221ENST00000529873 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-221ENST00000529873 Q8N6K4 173 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 CRIP1P50238 77 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 CXCL6P80162 114 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 C9orf85Q96MD7 179 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 EML6Q6ZMW3 1958 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 MBD6Q96DN6 1003 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
CTNND1-221ENST00000529873 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms