RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 H0Y9J4 135 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 MP68P56378 58 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 COL4A4P53420 1690 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-220ENST00000529526 SHANK1Q9Y566 2161 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 ATOX1O00244 68 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.1□□□□□ -1.439e-7■■■□□ 18
CTNND1-220ENST00000529526 TRBV10-1A0A0K0K1A3 114 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 NEXN-AS1Q8NBZ9 246 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 K7EQG2 157 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 TMEM256-PLSCR3K7ERE1 68 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 CRIP1P50238 77 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 PCNX2A6NKB5 2137 aa6.09□□□□□ -1.43
CTNND1-220ENST00000529526 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-220ENST00000529526 MLST8Q9BVC4 326 aa6.09□□□□□ -1.44
CTNND1-220ENST00000529526 G3V4G9 280 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 H3BQ85 93 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 LY6LH3BQJ8 138 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 RNF183Q96D59 192 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 ZFAND3Q9H8U3 227 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 SLPIP03973 132 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 NOTCH3Q9UM47 2321 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 ODF3Q96PU9 254 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 V9GYY9 64 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 A0A096LNI7 61 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 H3BT86 120 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 CFAP126Q5VTH2 177 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 LRRC75A-AS1Q8N1F1 130 aa6.08□□□□□ -1.44
CTNND1-220ENST00000529526 CRYGDP07320 174 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 ALPK3Q96L96 1907 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 B9D2Q9BPU9 175 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 CACNA1HO95180 2353 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 TMEM223A0PJW6 202 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 SEC61GP60059 68 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 C18orf65Q6ZTR6 163 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 MBD6Q96DN6 1003 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 MED13LQ71F56 2210 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 Q6ZSV7 163 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 PIK3CD-AS1Q5SR53 167 aa6.07□□□□□ -1.44
CTNND1-220ENST00000529526 C11orf71Q6IPW1 123 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 RNF185Q96GF1 192 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 TRAV23DV6A0A075B6W5 121 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 FREM1Q5H8C1 2179 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 TEX49A0A1B0GTD5 131 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-220ENST00000529526 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 PCDH15Q96QU1 1955 aa6.06□□□□□ -1.44
CTNND1-220ENST00000529526 A8MZ25 164 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 PRM2P04554 102 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 UFSP1Q6NVU6 142 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 SCXQ7RTU7 201 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 DCANP1Q8TF63 244 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 TECTAO75443 2155 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 UPK3BQ9BT76 320 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 ZFHX2Q9C0A1 2572 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-220ENST00000529526 LYRM9A8MSI8 78 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 M0QY20 66 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 WFDC10AQ9H1F0 79 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-220ENST00000529526 FAM19A1Q7Z5A9 133 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 ZNF843Q8N446 348 aa6.05□□□□□ -1.44
CTNND1-220ENST00000529526 SDIM1Q6ZPB5 146 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 NCOA6Q14686 2063 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-220ENST00000529526 Q6ZS46 218 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 ATRXP46100 2492 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-220ENST00000529526 Q8N976 141 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 IGLV2-11P01706 119 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 EBI3Q14213 229 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 ZNF702PQ9H963 129 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 PRR9Q5T870 116 aa6.04□□□□□ -1.44
CTNND1-220ENST00000529526 BBC3Q96PG8 261 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-220ENST00000529526 TRBV6-8A0A0A6YYG3 113 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 LY6G6DO95868 133 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 HILS1P60008 231 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 PCNX3Q9H6A9 2034 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 A0A087WZ39 114 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 SMIM9A6NGZ8 99 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 IGKV4-1P06312 121 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 LINC00526Q96FQ7 95 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 LINC00308Q8TCZ7 52 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 U3KQK5 164 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 KIAA1549Q9HCM3 1950 aa6.03□□□□□ -1.44
CTNND1-220ENST00000529526 H7C423 109 aa6.02□□□□□ -1.45
CTNND1-220ENST00000529526 BPY2O14599 106 aa6.02□□□□□ -1.45
CTNND1-220ENST00000529526 MT-ATP8P03928 68 aa6.02□□□□□ -1.45
CTNND1-220ENST00000529526 TRIAP1O43715 76 aa6.02□□□□□ -1.45
CTNND1-220ENST00000529526 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
CTNND1-220ENST00000529526 FSTL3O95633 263 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 C11orf21Q9P2W6 132 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 CDSNQ15517 529 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms