RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 MUC4Q99102 2169 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 HECTD1Q9ULT8 2610 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 VMO1Q7Z5L0 202 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 NAV2Q8IVL1 2488 aa8.39□□□□□ -1.07
CLNS1A-204ENST00000525428 PPP1R17O96001 155 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 TMEM219Q86XT9 240 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 RNF5Q99942 180 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 DPM3Q9P2X0 92 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 UBR5O95071 2799 aaPredicted RBP8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 LY6LH3BQJ8 138 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 LITAFQ99732 161 aa8.38□□□□□ -1.07
CLNS1A-204ENST00000525428 DEFB121Q5J5C9 76 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 A0A1B0GX51 115 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 TRACP01848 142 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 ZNF843Q8N446 348 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 KAAG1Q9UBP8 84 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 FBN2P35556 2912 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 CSPG4Q6UVK1 2322 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 B9A039 149 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 F5H768 121 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 M0R1W7 72 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 OVOL1O14753 267 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 LINC00315P59091 139 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 DAZ4Q86SG3 579 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 DAZ3Q9NR90 486 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-204ENST00000525428 NUP37Q8NFH4 326 aa8.36□□□□□ -1.07
CLNS1A-204ENST00000525428 NXPH4O95158 308 aa8.36□□□□□ -1.07
CLNS1A-204ENST00000525428 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
CLNS1A-204ENST00000525428 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
CLNS1A-204ENST00000525428 KMT2BQ9UMN6 2715 aaPredicted RBP8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 G3V318 75 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 NBPF19A0A087WUL8 3843 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 OXTP01178 125 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 ACYP1P07311 99 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 NPBQ8NG41 125 aa8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
CLNS1A-204ENST00000525428 DPH3Q96FX2 82 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.072e-13■■■■■ 32
CLNS1A-204ENST00000525428 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 CRYGAP11844 174 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 DCANP1Q8TF63 244 aa8.34□□□□□ -1.07
CLNS1A-204ENST00000525428 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.08
CLNS1A-204ENST00000525428 CCDC140Q96MF4 163 aa8.34□□□□□ -1.08
CLNS1A-204ENST00000525428 IGHV4OR15-8A0A075B7B6 117 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 A0A087WVE0 104 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 A0A087WW49 117 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 MIAQ16674 131 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 TIRAPP58753 221 aa8.33□□□□□ -1.08
CLNS1A-204ENST00000525428 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 WIPF1O43516 503 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 BAALC-AS2P0C853 105 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 CD28P10747 220 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 ITPR2Q14571 2701 aa8.32□□□□□ -1.08
CLNS1A-204ENST00000525428 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 Q9HAA7 133 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 ANKRD17O75179 2603 aaKnown RBP8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 A0A0J9YX75 114 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 ATP6V0E1O15342 81 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 Q8N2B8 174 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 SORL1Q92673 2214 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 ATOX1O00244 68 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 C10orf105Q8TEF2 133 aa8.31□□□□□ -1.08
CLNS1A-204ENST00000525428 FLNBO75369 2602 aaKnown RBP8.3□□□□□ -1.08
CLNS1A-204ENST00000525428 IGHV3-73A0A0B4J1V6 119 aa8.3□□□□□ -1.08
CLNS1A-204ENST00000525428 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
CLNS1A-204ENST00000525428 ATP5G1P05496 136 aa8.3□□□□□ -1.08
CLNS1A-204ENST00000525428 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
CLNS1A-204ENST00000525428 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms