RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 S100A3P33764 101 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 FUSP35637 526 aaKnown RBP eCLIP2.18□□□□□ -2.06
CD44-217ENST00000525348 KLKP1Q107X0 134 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 SOSTDC1Q6X4U4 206 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 SPTSSAQ969W0 71 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 OSTCQ9NRP0 149 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
CD44-217ENST00000525348 PIEZO1Q92508 2521 aa2.18□□□□□ -2.06
CD44-217ENST00000525348 SETXQ7Z333 2677 aaKnown RBP2.17□□□□□ -2.06
CD44-217ENST00000525348 DMDP11532 3685 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 IGHV1-69DA0A0B4J2H0 117 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 A0A1B0GWA3 101 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 C16orf90A8MZG2 172 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 C10orf142B7Z368 130 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 C9JCJ5 164 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 GNRH2O43555 120 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 IGLV2-8P01709 118 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 IFI6P09912 130 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 CISD3P0C7P0 127 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 CKS2P33552 79 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 UBE2AP49459 152 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 NCBP2P52298 156 aaKnown RBP eCLIP2.17□□□□□ -2.06
CD44-217ENST00000525348 DYNLT1P63172 113 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 RPS21P63220 83 aaKnown RBP2.17□□□□□ -2.06
CD44-217ENST00000525348 SERF2P84101 59 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 REG3AQ06141 175 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 RBMY1FQ15415 496 aaKnown RBP2.17□□□□□ -2.06
CD44-217ENST00000525348 ESRGQ1W209 222 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 Q6JHZ5 121 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 Q6ZR03 302 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 VMO1Q7Z5L0 202 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 CLECL1Q8IZS7 167 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 CCL4L1Q8NHW4 92 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 NPCDR1Q9BY65 106 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 SLC25A22Q9H936 323 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
CD44-217ENST00000525348 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
CD44-217ENST00000525348 MAP1BP46821 2468 aaKnown RBP2.16□□□□□ -2.06
CD44-217ENST00000525348 TRIOO75962 3097 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGHV3OR16-13A0A075B7E8 117 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGLV3-32A0A0A0MS00 114 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.16□□□□□ -2.06
CD44-217ENST00000525348 TRAV3A0A0B4J244 114 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGKV1-12A0A0C4DH73 117 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 LOC107984156A0A0G2JMH3 177 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 CTXND1A0A1B0GTU2 59 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 CRYM-AS1A6NIL9 109 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 C11orf94C9JXX5 98 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 C3orf84H3BNL1 204 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 NDUFC1O43677 76 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGKV1D-33P01593 117 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGKV1-33P01594 117 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 IGKV1D-12P01611 117 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 PRM2P04554 102 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 PIRTP0C851 137 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 CHTF8P0CG12 524 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 MGST1P10620 155 aaKnown RBP2.16□□□□□ -2.06
CD44-217ENST00000525348 CD28P10747 220 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 HMGA1P17096 107 aaKnown RBP2.16□□□□□ -2.06
CD44-217ENST00000525348 FXYD6P3P58550 94 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 ARL17AQ8IVW1 177 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 TXNDC17Q9BRA2 123 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 PLA2G12AQ9BZM1 189 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 SND1-IT1Q9HBX3 110 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 TAS2R4Q9NYW5 299 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 UBE2D4Q9Y2X8 147 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 TIMM9Q9Y5J7 89 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 COL5A1P20908 1838 aaPredicted RBP2.16□□□□□ -2.06
CD44-217ENST00000525348 ARHGAP32A7KAX9 2087 aa2.16□□□□□ -2.06
CD44-217ENST00000525348 PKD1L2Q7Z442 2459 aa2.15□□□□□ -2.06
CD44-217ENST00000525348 USP24Q9UPU5 2620 aa2.15□□□□□ -2.06
CD44-217ENST00000525348 IGLV4-60A0A075B6I1 120 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 TRAV7A0A075B6U4 112 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 TMEM30CPA0ZSE6 113 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 C17orf51A8MQB3 221 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 F8WEM9 126 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 J3QLW9 94 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 IFI27P40305 119 aaPredicted RBP2.15□□□□□ -2.07
CD44-217ENST00000525348 FGF12P61328 243 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.15□□□□□ -2.07
CD44-217ENST00000525348 C11orf71Q6IPW1 123 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 SLC48A1Q6P1K1 146 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 C20orf197Q8N268 126 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 LINC00269Q8N2A0 174 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 DAND5Q8N907 189 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 HIST1H4GQ99525 98 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 GCN1Q92616 2671 aaKnown RBP2.15□□□□□ -2.07
CD44-217ENST00000525348 ESPL1Q14674 2120 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 ZNF292O60281 2723 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 NCOR1O75376 2440 aa2.15□□□□□ -2.07
CD44-217ENST00000525348 HEATR5BQ9P2D3 2071 aa2.14□□□□□ -2.07
CD44-217ENST00000525348 hDV103S1A0JD37 113 aa2.14□□□□□ -2.07
CD44-217ENST00000525348 B4DSR2 109 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms