RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SPINK6Q6UWN8 80 aa14.16□□□□□ -0.14
PVT1-218ENST00000523328 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
PVT1-218ENST00000523328 TPPP3Q9BW30 176 aa14.16□□□□□ -0.14
PVT1-218ENST00000523328 NIT2Q9NQR4 276 aa14.16□□□□□ -0.14
PVT1-218ENST00000523328 A0A096LNI7 61 aa14.15□□□□□ -0.14
PVT1-218ENST00000523328 IGKV3OR2-268A0A0C4DH90 116 aa14.14□□□□□ -0.15
PVT1-218ENST00000523328 ARPC5O15511 151 aa14.14□□□□□ -0.15
PVT1-218ENST00000523328 RPL35P42766 123 aaKnown RBP14.14□□□□□ -0.15
PVT1-218ENST00000523328 AMTP48728 403 aa14.14□□□□□ -0.15
PVT1-218ENST00000523328 CACNG7P62955 275 aa14.14□□□□□ -0.15
PVT1-218ENST00000523328 REG3GQ6UW15 175 aa14.14□□□□□ -0.15
PVT1-218ENST00000523328 GVQW2A0A096LPI5 108 aaPredicted RBP14.13□□□□□ -0.15
PVT1-218ENST00000523328 SRSF9Q13242 221 aaKnown RBP eCLIP14.13□□□□□ -0.154e-6■■■■□ 20.8
PVT1-218ENST00000523328 COTL1Q14019 142 aa14.13□□□□□ -0.15
PVT1-218ENST00000523328 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
PVT1-218ENST00000523328 OR2D3Q8NGH3 330 aa14.12□□□□□ -0.15
PVT1-218ENST00000523328 FAM213BQ8TBF2 198 aa14.12□□□□□ -0.15
PVT1-218ENST00000523328 CHCHD10Q8WYQ3 142 aaPredicted RBP14.12□□□□□ -0.15
PVT1-218ENST00000523328 KCNRGQ8N5I3 272 aa14.11□□□□□ -0.15
PVT1-218ENST00000523328 C19orf71A6NCJ1 209 aa14.1□□□□□ -0.15
PVT1-218ENST00000523328 RPS20P60866 119 aaKnown RBP14.1□□□□□ -0.15
PVT1-218ENST00000523328 LPAP08519 4548 aa14.09□□□□□ -0.15
PVT1-218ENST00000523328 TRGC1P0CF51 173 aa14.09□□□□□ -0.15
PVT1-218ENST00000523328 UMAD1C9J7I0 102 aa14.08□□□□□ -0.16
PVT1-218ENST00000523328 F2Z2F3 143 aa14.08□□□□□ -0.16
PVT1-218ENST00000523328 C11orf52Q96A22 123 aa14.08□□□□□ -0.16
PVT1-218ENST00000523328 LINC00474Q9P2X8 69 aa14.08□□□□□ -0.16
PVT1-218ENST00000523328 NTF3P20783 257 aa14.07□□□□□ -0.16
PVT1-218ENST00000523328 FOXI1Q12951 378 aa14.07□□□□□ -0.16
PVT1-218ENST00000523328 CENPWQ5EE01 88 aa14.07□□□□□ -0.16
PVT1-218ENST00000523328 LYZL1Q6UWQ5 148 aa14.07□□□□□ -0.16
PVT1-218ENST00000523328 Q6ZRP5 223 aa14.06□□□□□ -0.16
PVT1-218ENST00000523328 H2AFB1P0C5Y9 115 aa14.05□□□□□ -0.16
PVT1-218ENST00000523328 Q6ZNX1 250 aa14.05□□□□□ -0.16
PVT1-218ENST00000523328 AMMECR1LQ6DCA0 310 aa14.04□□□□□ -0.16
PVT1-218ENST00000523328 GATD1Q8NB37 220 aa14.04□□□□□ -0.16
PVT1-218ENST00000523328 XKRY2A2RUG3 117 aa14.03□□□□□ -0.16
PVT1-218ENST00000523328 LINC00526Q96FQ7 95 aa14.03□□□□□ -0.16
PVT1-218ENST00000523328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.02□□□□□ -0.17
PVT1-218ENST00000523328 IGKV2-29A2NJV5 120 aaPredicted RBP14.02□□□□□ -0.17
PVT1-218ENST00000523328 IFNA1P01562 189 aa14.02□□□□□ -0.17
PVT1-218ENST00000523328 RNASEKQ6P5S7 137 aaKnown RBP14.02□□□□□ -0.17
PVT1-218ENST00000523328 C9orf62Q8N4C0 152 aa14.02□□□□□ -0.17
PVT1-218ENST00000523328 PKIGQ9Y2B9 76 aa14.02□□□□□ -0.17
PVT1-218ENST00000523328 TRAV26-2A0A0B4J265 109 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 SMLR1H3BR10 107 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 H7C423 109 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 FGF6P10767 208 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 CTRLP40313 264 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 CCL20P78556 96 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 ZNF345Q14585 488 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 SMIM12Q96EX1 92 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 CARD19Q96LW7 228 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 MANBALQ9NQG1 85 aa14.01□□□□□ -0.17
PVT1-218ENST00000523328 RAB19A4D1S5 217 aa14□□□□□ -0.17
PVT1-218ENST00000523328 NCR2O95944 276 aa14□□□□□ -0.17
PVT1-218ENST00000523328 GNG13Q9P2W3 67 aa14□□□□□ -0.17
PVT1-218ENST00000523328 XCL1P47992 114 aa13.99□□□□□ -0.17
PVT1-218ENST00000523328 OR5A1Q8NGJ0 315 aa13.99□□□□□ -0.17
PVT1-218ENST00000523328 RPL39LQ96EH5 51 aaKnown RBP13.99□□□□□ -0.17
PVT1-218ENST00000523328 CNFNQ9BYD5 112 aa13.99□□□□□ -0.17
PVT1-218ENST00000523328 TRBV20OR9-2A0A075B6H5 130 aa13.98□□□□□ -0.17
PVT1-218ENST00000523328 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
PVT1-218ENST00000523328 APCSP02743 223 aa13.98□□□□□ -0.17
PVT1-218ENST00000523328 GNG4P50150 75 aa13.98□□□□□ -0.17
PVT1-218ENST00000523328 TWIST1Q15672 202 aa13.97□□□□□ -0.17
PVT1-218ENST00000523328 LINC00959A0A1B0GUT2 108 aa13.96□□□□□ -0.17
PVT1-218ENST00000523328 CCL25O15444 150 aa13.96□□□□□ -0.17
PVT1-218ENST00000523328 ZNF25P17030 456 aaPredicted RBP13.96□□□□□ -0.17
PVT1-218ENST00000523328 PTTG1IPP53801 180 aa13.95□□□□□ -0.18
PVT1-218ENST00000523328 SYCNQ0VAF6 134 aa13.95□□□□□ -0.18
PVT1-218ENST00000523328 TRAV1-1A0A0B4J248 108 aa13.94□□□□□ -0.18
PVT1-218ENST00000523328 FAM231BA6NCW3 169 aa13.94□□□□□ -0.18
PVT1-218ENST00000523328 SDHAF1A6NFY7 115 aa13.94□□□□□ -0.18
PVT1-218ENST00000523328 NUDT10Q8NFP7 164 aa13.94□□□□□ -0.18
PVT1-218ENST00000523328 NUDT11Q96G61 164 aa13.94□□□□□ -0.18
PVT1-218ENST00000523328 BCL2L11O43521 198 aa13.93□□□□□ -0.18
PVT1-218ENST00000523328 BIN3Q9NQY0 253 aa13.93□□□□□ -0.18
PVT1-218ENST00000523328 A0A1W2PNN7 141 aa13.92□□□□□ -0.18
PVT1-218ENST00000523328 ZNF561-AS1K7EIQ3 104 aa13.92□□□□□ -0.18
PVT1-218ENST00000523328 KANTRA0A1W2PQU2 76 aa13.91□□□□□ -0.18
PVT1-218ENST00000523328 HMSDA8MTL9 139 aa13.91□□□□□ -0.18
PVT1-218ENST00000523328 FOXA3P55318 350 aaPredicted RBP13.91□□□□□ -0.18
PVT1-218ENST00000523328 GAGE2BQ13066 116 aa13.91□□□□□ -0.18
PVT1-218ENST00000523328 BTF3L4Q96K17 158 aa13.91□□□□□ -0.18
PVT1-218ENST00000523328 ESDP10768 282 aa13.9□□□□□ -0.18
PVT1-218ENST00000523328 MEF2BQ02080 365 aaPredicted RBP13.9□□□□□ -0.18
PVT1-218ENST00000523328 CD164L2Q6UWJ8 174 aa13.9□□□□□ -0.18
PVT1-218ENST00000523328 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
PVT1-218ENST00000523328 PSORS1C2Q9UIG4 136 aa13.9□□□□□ -0.18
PVT1-218ENST00000523328 LOC107984640A0A0U1RRK4 108 aa13.89□□□□□ -0.19
PVT1-218ENST00000523328 PDE6DO43924 150 aa13.89□□□□□ -0.19
PVT1-218ENST00000523328 CAMPP49913 170 aa13.89□□□□□ -0.19
PVT1-218ENST00000523328 TEX261Q6UWH6 196 aa13.89□□□□□ -0.19
PVT1-218ENST00000523328 RPP21Q9H633 154 aaKnown RBP13.89□□□□□ -0.19
PVT1-218ENST00000523328 MED9Q9NWA0 146 aa13.89□□□□□ -0.19
PVT1-218ENST00000523328 I3L3M4 83 aa13.88□□□□□ -0.19
PVT1-218ENST00000523328 EIF5AP63241 154 aaKnown RBP13.88□□□□□ -0.19
PVT1-218ENST00000523328 SS18Q15532 418 aa13.88□□□□□ -0.19
PVT1-218ENST00000523328 PMCHP20382 165 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms