RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-218	ENST00000522222	OR11H2	Q8NH07	326 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	RNASE8	Q8TDE3	154 aa	Known RBP	4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	RNF183	Q96D59	192 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	FAM19A4	Q96LR4	140 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	VPS25	Q9BRG1	176 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	CSTL1	Q9H114	145 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	SPCS1	Q9Y6A9	102 aa		4.95	□□□□□ -1.62
SPIDR-218	ENST00000522222	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	STARD9	Q9P2P6	4700 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	TRBV25-1	A0A075B6N4	114 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222		A0A0J9YWU9	116 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222		H3BUT2	72 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	GIG44	P09565	113 aa	Predicted RBP	4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	GCSH	P23434	173 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	CASC10	Q5T4H9	136 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222		Q6ZVH6	145 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	PCP2	Q8IVA1	136 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	ZFAND2A	Q8N6M9	145 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	SYT8	Q8NBV8	401 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	TMEM141	Q96I45	108 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	SCGB3A1	Q96QR1	104 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	C11orf21	Q9P2W6	132 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	CYSLTR1	Q9Y271	337 aa		4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.94	□□□□□ -1.62
SPIDR-218	ENST00000522222	KLLN	B2CW77	178 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222		E9PLD3	99 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222		H3BMM0	161 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	MORN3	Q6PF18	240 aa	Predicted RBP	4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	FAM159A	Q6UWV7	190 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	FOXI2	Q6ZQN5	318 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	C20orf173	Q96LM9	149 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	TIMM17A	Q99595	171 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	KIR2DL4	Q99706	377 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	KRTAP17-1	Q9BYP8	105 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	MRPL35	Q9NZE8	188 aa	Known RBP	4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	TP73-AS1	Q9UF72	201 aa		4.93	□□□□□ -1.62
SPIDR-218	ENST00000522222	TRBV6-5	A0A0K0K1A5	114 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	MYMX	A0A1B0GTQ4	84 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222		A0A1B0GWB2	263 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222		F6UB75	175 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222		F8W1H4	67 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	VCY	O14598	125 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	DUSP14	O95147	198 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	FXYD7	P58549	80 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	RNF151	Q2KHN1	245 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	ANXA2R	Q3ZCQ2	193 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	C2orf66	Q6UXQ4	117 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	NEXN-AS1	Q8NBZ9	246 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	HIST1H4G	Q99525	98 aa		4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-218	ENST00000522222	IGKV2D-26	A0A0A0MRZ7	120 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222		A0A0J9YX75	114 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	IGKV3-20	P01619	116 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	MGP	P08493	103 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	GATA1	P15976	413 aa	Predicted RBP	4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	RHOH	Q15669	191 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	PRR9	Q5T870	116 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	NEGR1	Q7Z3B1	354 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222		Q8NAQ8	132 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	IL17D	Q8TAD2	202 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	RASL10A	Q92737	203 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	ZNF479	Q96JC4	524 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	KRTAP4-2	Q9BYR5	136 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	C11orf68	Q9H3H3	251 aa	Known RBP	4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	NHP2	Q9NX24	153 aa	Known RBP	4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	XCL2	Q9UBD3	114 aa		4.91	□□□□□ -1.62
SPIDR-218	ENST00000522222	TRGV11	A0A075B6L2	103 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	TRAV26-2	A0A0B4J265	109 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	IGHV4-28	A0A0C4DH34	117 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222		A8MTW9	85 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	DEFB4A	O15263	64 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	PRB4	P10163	310 aa	Predicted RBP	4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	RNASE3	P12724	160 aa	Known RBP	4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	RNASE4	P34096	147 aa	Known RBP	4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	FXYD2	P54710	66 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	PMVK	Q15126	192 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	C14orf178	Q8N769	122 aa	Predicted RBP	4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	CSNK1G2-AS1	Q8NCQ2	148 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	BAALC	Q8WXS3	180 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	RAB37	Q96AX2	223 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	CLUHP3	Q96NS8	147 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222		X6R8D5	127 aa		4.9	□□□□□ -1.63
SPIDR-218	ENST00000522222	TRBV7-3	A0A075B6L6	115 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	TRBV27	A0A0K0K1C4	114 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	C11orf86	A6NJI1	115 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	IGLL5	B9A064	214 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	GAS8-AS1	O95177	125 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	RBMY1A1	P0DJD3	496 aa	Known RBP	4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	RBMY1C	P0DJD4	496 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	SCGB1A1	P11684	91 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	CRYBA4	P53673	196 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	POLR2K	P53803	58 aa	Known RBP	4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	RBMY1F	Q15415	496 aa	Known RBP	4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	C12orf74	Q32Q52	190 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	PIK3CD-AS1	Q5SR53	167 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	AMTN	Q6UX39	209 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	SCGB1D4	Q6XE38	83 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	C1QTNF4	Q9BXJ3	329 aa		4.89	□□□□□ -1.63
SPIDR-218	ENST00000522222	KRTAP4-9	Q9BYQ8	210 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms