RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 LINC00612Q8N6U2 182 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 IMMP2LQ96T52 175 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 TRGV9Q99603 122 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 MRPL32Q9BYC8 188 aaKnown RBP3.3□□□□□ -1.88
SDCBP-207ENST00000520168 LAMTOR3Q9UHA4 124 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 CYSLTR1Q9Y271 337 aa3.3□□□□□ -1.88
SDCBP-207ENST00000520168 TRBV24-1A0A075B6N3 115 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 C9JAW5 83 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
SDCBP-207ENST00000520168 COX7A2P2O60397 106 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 HYPMO75409 117 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 NDUFB4O95168 129 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 ARL14EPLP0DKL9 152 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
SDCBP-207ENST00000520168 GNG5P63218 68 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 ELOBQ15370 118 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 SPINK13Q1W4C9 94 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 C10orf113Q5VZT2 155 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 MRPL55Q7Z7F7 128 aaKnown RBP3.29□□□□□ -1.88
SDCBP-207ENST00000520168 FER1L6-AS1Q8NA97 138 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 OR51G1Q8NGK1 321 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 C11orf52Q96A22 123 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 TMEM18Q96B42 140 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 LINC01587Q99440 93 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 DERL1Q9BUN8 251 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 GTSF1LQ9H1H1 148 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 PARLQ9H300 379 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
SDCBP-207ENST00000520168 HIGD1AQ9Y241 93 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
SDCBP-207ENST00000520168 IGKV1OR2-108A0A075B7D4 117 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 GAGE12HA6NDE8 117 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 SNURFLB1AK76 121 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 C9JCJ5 164 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 F6UB75 175 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 H7BYZ3 331 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 PFN1P07737 140 aaKnown RBP3.28□□□□□ -1.88
SDCBP-207ENST00000520168 SRIP30626 198 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 RPS10P46783 165 aaKnown RBP3.28□□□□□ -1.88
SDCBP-207ENST00000520168 GALR1P47211 349 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 DEFB1P60022 68 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 SUMO2P61956 95 aaKnown RBP3.28□□□□□ -1.88
SDCBP-207ENST00000520168 ADIRFQ15847 76 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 Q8N814 137 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 PYGO2Q9BRQ0 406 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 PAXXQ9BUH6 204 aa3.28□□□□□ -1.88
SDCBP-207ENST00000520168 MRPL36Q9P0J6 103 aaKnown RBP3.28□□□□□ -1.88
SDCBP-207ENST00000520168 IGKV1D-37A0A075B6S9 117 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 TRAV9-1A0A075B6T8 112 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 TRIAP1O43715 76 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 PRM2P04554 102 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 HTN1P15515 57 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 NTF3P20783 257 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
SDCBP-207ENST00000520168 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 C5orf17Q8NAS9 161 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 PLEKHB2Q96CS7 222 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 VSIG2Q96IQ7 327 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 FAM167A-AS1Q96KT0 104 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 AP1S3Q96PC3 154 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
SDCBP-207ENST00000520168 TRGV2A0A075B6R0 118 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 TRAV12-2A0A075B6T6 113 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 FAM240AA0A1B0GVK7 77 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 A6NDN8 102 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 F5H697 171 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 IGLV2-8P01709 118 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 GPX1P07203 203 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 GZMBP10144 247 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
SDCBP-207ENST00000520168 UBE2L3P68036 154 aaKnown RBP3.26□□□□□ -1.89
SDCBP-207ENST00000520168 RPL18AQ02543 176 aaKnown RBP3.26□□□□□ -1.89
SDCBP-207ENST00000520168 ZNF90Q03938 601 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
SDCBP-207ENST00000520168 PATE2Q6UY27 113 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 NEGR1Q7Z3B1 354 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 LINC00305Q7Z4B0 112 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 COX8CQ7Z4L0 72 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 HIST3H2BBQ8N257 126 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 OR10G8Q8NGN5 311 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 BLNKQ8WV28 456 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 PRADC1Q9BSG0 188 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 SLC25A2Q9BXI2 301 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 OSTCQ9NRP0 149 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 UQCR10Q9UDW1 63 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
SDCBP-207ENST00000520168 PGPA6NDG6 321 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 ZNF324O75467 553 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-207ENST00000520168 DPM2O94777 84 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 IGLV2-11P01706 119 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 TRGC2P03986 189 aa3.25□□□□□ -1.89
SDCBP-207ENST00000520168 CXCL1P09341 107 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms