RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 C8orf59Q8N0T1 100 aaPredicted RBP0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 Q8N8P6 123 aa0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 AKAP11Q9UKA4 1901 aa0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 BSNQ9UPA5 3926 aa0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 PRKDCP78527 4128 aaKnown RBP0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 FAT2Q9NYQ8 4349 aa0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 CFTRP13569 1480 aa0.03□□□□□ -2.4
UBLCP1-202ENST00000519276 MYH6P13533 1939 aa0.03□□□□□ -2.41
UBLCP1-202ENST00000519276 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.41
UBLCP1-202ENST00000519276 LRRC37A3O60309 1634 aa0.03□□□□□ -2.41
UBLCP1-202ENST00000519276 HRNRQ86YZ3 2850 aaPredicted RBP0.03□□□□□ -2.41
UBLCP1-202ENST00000519276 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 LOC285095A0A1B0GVY8 99 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 M0R135 149 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 SSSCA1O60232 199 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 GNG7O60262 68 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 RBM3P98179 157 aaKnown RBP0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 COX17Q14061 63 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 CFAP126Q5VTH2 177 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 TTC9CQ8N5M4 171 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 LSM10Q969L4 123 aaKnown RBP0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 SCN3BQ9NY72 215 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 SPCS1Q9Y6A9 102 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 NRXN2Q9P2S2 1712 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 PHIPQ8WWQ0 1821 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 ZNF609O15014 1411 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 CASKIN1Q8WXD9 1431 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 TNS1Q9HBL0 1735 aaKnown RBP0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 TRBV7-3A0A075B6L6 115 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 CTXND1A0A1B0GTU2 59 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 UQCR11O14957 56 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 TNFP01375 233 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 APOC3P02656 99 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 AKAIN1P0CW23 69 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 IFITM1P13164 125 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 TPPP2P59282 170 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 RPL13AP3Q6NVV1 102 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 C5orf38Q86SI9 138 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 PP6455Q8WZ26 134 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 AMELXQ99217 191 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 MGST2Q99735 147 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 FAM107BQ9H098 131 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 NPVFQ9HCQ7 196 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 DYNLRB1Q9NP97 96 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 IER3IP1Q9Y5U9 82 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 IGSF10Q6WRI0 2623 aa0.02□□□□□ -2.41
UBLCP1-202ENST00000519276 MYOM3Q5VTT5 1437 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 PPIP5K1Q6PFW1 1433 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 GOLGA3Q08378 1498 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 MUC22E2RYF6 1773 aaPredicted RBP0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 CELSR1Q9NYQ6 3014 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 F8P00451 2351 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 DMBT1Q9UGM3 2413 aaPredicted RBP0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 F8VRH5 84 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 SARNPP82979 210 aaKnown RBP0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 WFDC2Q14508 124 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 TMEM170BQ5T4T1 132 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 Q5VSD8 79 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 COMMD6Q7Z4G1 85 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 BAGE2Q86Y30 109 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 MYOZ3Q8TDC0 251 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 PRO0255Q9UI72 69 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 LINC01558Q9Y6Z2 57 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 V9GYH0 126 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 PARP14Q460N5 1801 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 CSMD3Q7Z407 3707 aa0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 ASXL3Q9C0F0 2248 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 UNC79Q9P2D8 2635 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 TRAV22A0A0B4J277 110 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 IGLC7A0M8Q6 106 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 M0R3E3 92 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 CFDP00746 253 aaPredicted RBP0□□□□□ -2.41
UBLCP1-202ENST00000519276 HAMPP81172 84 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 CATR1Q13166 79 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 WHAMMP3Q1A5X7 153 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 KTN1Q86UP2 1357 aaKnown RBP0□□□□□ -2.41
UBLCP1-202ENST00000519276 Q8IZM0 81 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 NDUFA4L2Q9NRX3 87 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 SHANK2Q9UPX8 1470 aa0□□□□□ -2.41
UBLCP1-202ENST00000519276 LRP2P98164 4655 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 POLQO75417 2590 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 ZFYVE26Q68DK2 2539 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 NCOR2Q9Y618 2525 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 IGF2RP11717 2491 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 PI4KAP42356 2102 aa-0□□□□□ -2.41
UBLCP1-202ENST00000519276 MRC1P22897 1456 aa-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 LOC100130705A0A1B0GUX0 176 aa-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 FAM24AA6NFZ4 105 aa-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 MIF4GDA9UHW6 222 aaKnown RBP-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 H3BQ15 152 aa-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 BCE1O60756 84 aa-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 ATP5EP56381 51 aaPredicted RBP-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 DCDP81605 110 aaKnown RBP-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 MRPL54Q6P161 138 aaKnown RBP-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 TMEM263Q8WUH6 116 aaKnown RBP-0.01□□□□□ -2.41
UBLCP1-202ENST00000519276 DPH3P1Q9H4G8 78 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms